Bactrocera dorsalis (oriental fruit fly): 105228160
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Entry
105228160 CDS
T09719
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Pathway
bdr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105228160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdr03021
]
105228160
03019 Messenger RNA biogenesis [BR:
bdr03019
]
105228160
Transcription machinery [BR:
bdr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105228160
Messenger RNA biogenesis [BR:
bdr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105228160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCHC
zf-CCCH_3
Torus
zf-CCCH_4
zf-CCCH_2
Nab2-like_zf-CCCH_
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
105228160
NCBI-ProteinID:
XP_011206160
UniProt:
A0A6I9V433
LinkDB
All DBs
Position
Unknown
AA seq
292 aa
AA seq
DB search
MEILLANVNNIDFKIERDLIEQIGAVALPFFGMDKSMAAVCQFVSTQNGLECEKGSSCPF
RHIRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMKKMPECYFYSRFNACHNKECPFLHIDP
ESKVKDCPWYDRGFCRHGPHCRHRHVRRVLCSNYLAGFCENGWSCKFMHPRFELPPISDT
TKEILLKKVPTCHFCGELGHKASACKKNPDANESSENRFKFNGFQKQNQAYSFKENTEGK
NGTEHVSSSNNFTKVPKPLDEITCYKCGNKGHYANKCPKGHLAFLSNQRSHK
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggaaattttactcgcaaatgttaataacatagattttaaaattgaacgagatttgatt
gaacaaattggtgccgtcgctttaccattcttcggaatggacaaatcgatggctgccgtt
tgtcaatttgtgagtacccaaaatggtttggagtgtgagaaaggctcatcctgccccttc
cgtcatattagaggagatagaactatagtgtgcaagcactggctaagaggattatgtaaa
aaaggagaccaatgcgaatttttacatgaatatgatatgaaaaaaatgccagaatgttac
ttttactctcgatttaatgcgtgtcataataaggaatgtccctttcttcatatcgatccg
gaaagcaaagtaaaagattgtccatggtatgatcggggcttttgtagacacgggccgcat
tgcagacaccgtcacgtacgtcgtgtactttgtagtaattacttggccggcttttgtgaa
aatggttggagttgtaaatttatgcatccccgattcgaactgcctccaatttcagacacg
acaaaagaaattttgcttaaaaaggtgccaacttgccacttttgtggagaactgggacat
aaagcttcggcgtgtaaaaaaaatcctgatgctaacgaaagtagtgaaaaccgtttcaaa
tttaatggcttccaaaaacaaaatcaagcgtacagttttaaagaaaacacagaaggtaaa
aacggaactgagcatgtgtcgtcgagtaataactttacaaaggtgccaaagcctttagat
gaaatcacttgctacaaatgtggaaataaagggcactacgcaaataagtgccctaaaggt
cacttagcatttttatcaaatcagagaagccacaaataa
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