Bactrocera dorsalis (oriental fruit fly): 105228896
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Entry
105228896 CDS
T09719
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Pathway
bdr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105228896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdr03019
]
105228896
03009 Ribosome biogenesis [BR:
bdr03009
]
105228896
03036 Chromosome and associated proteins [BR:
bdr03036
]
105228896
Enzymes [BR:
bdr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
105228896
Messenger RNA biogenesis [BR:
bdr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
105228896
Ribosome biogenesis [BR:
bdr03009
]
Eukaryotic type
90S particles
RNase
105228896
Prokaryotic type
rRNA processing factors
105228896
Chromosome and associated proteins [BR:
bdr03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
105228896
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
OB_DEPS-1_6th
DSRM_MRPL44
Motif
Other DBs
NCBI-GeneID:
105228896
NCBI-ProteinID:
XP_029407263
UniProt:
A0A8N4L2P8
LinkDB
All DBs
Position
Unknown
AA seq
1405 aa
AA seq
DB search
MNFQHFSMVPPPPPDIDQPKPAPPLPVGIPPGPPPLPPPETPSTELHQSVHATNSYSNDT
SPPSMPHASEASSIHSYPTTFYQQPYTDKSTPYYPHFQTTNTYTDVYNNEGVYNVPPPRR
TPYTPYDSTYNEYSYNQTYDGHVHRPYRGGREFTPNRGHYKPPGNIRPYPYEHKPMTNRA
PYTGRGNYRNTSTTPQINRPQFAPPSSQRGYGYSKYAETSRPHTQRERKYEARSDSKEPK
LETERDRLLKSWRSNYCETSEDIAEKLAEMVGQDEDSRTVWIRSSPADPFYRRSDVPNEV
VSTSRLEALCNLFEEKLVQRSDRVRKTLPPYEPPARKSRRRLCKHKSEACSSSSEDSSDD
ELKIEQDCCMEELSRKVQHPYRIHADLWHNDSGEMNDGPLCRCSAKSRRIGIRHGIYPGE
TGYKKCLPNSNNASQLYHYHITISPPTNFLTKTPTIIKHDEHEFIFEGFSMLTHSPLADL
PTCKVIRFNIEYTILYVAEKMPENFTIRELELFNQYLFHELLELVDFSLYPDGMSSSDTC
PAFHFLPRFVRDLPDNGKEVLAISEVLRYLLDSAAPLVDRDQLRCLNDISQHEWQDYVDF
IKGMLVTKPGYKPCSVRVDQLDRNVSDLPECFETEENVTHPAIVHFGIRPPQLSYAGNPE
YQKAWREYVKYRHLMANMSKPSFADKRKLEEKEARLQEMRTQGRMKRNITVAVSSKGYYR
TGIMCDIVQHAMLIPVLTGHLRFHRSLDLLEKSIGYSFKNRYLLQLALTHPSYKENYGTN
PDHARNSLTNCGIRQPEYGDRKIHYLNTRKRGINTLINIMSRFGKEYETMSNITHNERLE
FLGDAVVEFLSSIHLFFMFPDLEEGGLATYRAAIVQNQHLALLAKKLHLEEYMLYAHGSD
LCHELELRHAMANCFEALMGALLLDGGISIADEVFMNALYMENEQLKEIWKNYPEHPLQE
QEPLGDRGCISSYPVLQELTKFEESIGIQFKHIRLLARAFTDRSIGFTHLTLGSNQRLEF
LGDTVLQLICSEYLYRHFPEHHEGHLSLLRSSLVNNRTQAVVCDDLGMTKYAVYSNPKVE
LKTKDRADLLEAFLGALYVDKGLLYCEQFCHVCLFPRLQIFIMNQDWNDPKSKLQQCCLT
LRTMEGGEPDIPIYKVIESIGPTNTRVYTVAVYFRSKRLATATGSSIQQAEMNAAKQALE
NSRDLFPQLDHQKRVIAKSIKKQKGGELKPEFEETLTEQTKPKSTNSMEDESHLPKQYRV
REDISSDELPDDDSDVEDRQTTSISIQGQSSQSSDSSTSSDDEQLEKSRTHKKRSRKRVK
KTSQNRANSNSPKRANLEMDDMKSANKRNCEDVSSDDCFEENLTIPVPSTSENTKSSLNA
MPHDLQDLVEDVSSNSDIESGELSS
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atgaattttcaacacttttcgatggtgccacctccaccaccagatattgatcaaccaaaa
ccagctccaccacttccagttgggataccaccaggtcctccacctctgccgccaccagaa
acgccatcaacagaactacatcaatcagtgcacgcaacaaatagttactctaatgacact
tcgccgccttcgatgcctcacgcatctgaagcaagtagtattcattcttatcctacaact
ttttatcaacaaccttataccgacaagagtacgccttactatccacattttcaaacaaca
aatacatatacagatgtatataataatgaaggtgtatataatgtgccgccaccgaggaga
actccgtacacaccttatgattcaacatataatgaatatagttataaccaaacatatgat
ggccatgtacatcgaccttacagaggtggcagagaattcacgccaaatagaggacattat
aaaccacctggtaacatacgaccatatccatacgagcataagcctatgacaaatcgtgcg
ccttatactgggcgtggaaattatcgaaatacttctactacaccccaaatcaatcgtccg
caatttgcacctccatcgtctcagagaggttacggctattcgaaatatgccgaaacttct
agaccccatactcaacgagaaagaaagtatgaagcacgaagtgattccaaggaaccaaaa
cttgaaactgaaagagatagacttttgaaaagttggagatcaaattattgtgaaacctcc
gaagatattgccgaaaaattggcagaaatggttgggcaagatgaagactctcgaaccgta
tggatacgttcatcgccagcagatccattctatcgacgttctgatgtaccaaatgaagtt
gtctccaccagcagattagaagcgctgtgcaatttattcgaagaaaaattagtacaacgt
tcagatcgtgtacgcaaaacattaccaccctacgaaccgccagcacgcaagtcacgtcgc
cgcttgtgtaaacataaatctgaagcttgctcatcgtcgtcagaagactcttcagacgat
gaattaaaaattgagcaagattgttgtatggaggaactttcccgaaaagtgcaacatcca
tatcgtatacatgccgacttgtggcataacgattcgggtgaaatgaatgacggaccgctc
tgtcgctgttctgctaaatcgcgacgcattggcatacggcacggcatatatcccggtgaa
acaggttataagaaatgtttgccgaattccaataatgcttcgcaactttaccactatcat
attaccatttcgccgcccaccaattttctcactaaaacgccaacgataattaagcatgac
gagcatgagtttatcttcgaaggattttcgatgttgacacattcaccgcttgcagacttg
ccaacatgtaaagtcatacgcttcaacattgaatataccatcttgtatgttgctgagaaa
atgcccgagaatttcaccataagagaattggagttatttaatcaatatctattccacgaa
ctgctcgagctggtagatttttcgctataccccgacggcatgtccagttccgatacatgc
ccagcctttcatttcttaccacgtttcgtgcgtgatctacccgacaatggtaaagaagta
ttggccataagtgaagtgctccgttatttactggacagtgctgcaccacttgtcgatcgc
gatcaattgcgttgcctaaacgatatcagtcagcatgagtggcaggattatgttgatttc
ataaaaggaatgcttgtgacaaaaccgggttacaaaccatgttcggtacgcgtggatcag
ctggatcgcaatgtttctgatttacctgagtgttttgaaaccgaagagaacgtaacacat
ccggccatcgtgcattttggtatacgaccaccgcaactcagttatgccggcaatccggag
tatcagaaagcatggcgtgaatatgtaaaatatcgccatctaatggccaacatgtcgaag
ccatcgtttgccgacaagcgcaaactggaggaaaaagaagcgcgtttacaggaaatgcgc
actcaagggcgtatgaagcgtaacataactgtggcggtgagttcaaagggctattaccga
accggtattatgtgtgacattgtgcagcacgcgatgctcataccagtgcttactggtcac
ttgcgttttcatcgttcactggaccttttagagaaaagtataggttacagtttcaaaaat
cgatatttgttgcaattagcgttgacgcatccctcgtataaagaaaattacggcacgaat
cccgatcatgcgcgcaactcacttacgaattgtggtatacgtcagcccgagtatggtgat
cgtaaaatacattacttgaatacacgaaagcgtggcataaatacacttattaacataatg
tcacgctttggcaaggaatacgagactatgtctaatatcacgcataatgaacgtttggag
tttttgggcgatgctgttgttgagtttttaagttcaatacacttgtttttcatgtttccc
gatttggaggaaggtggtctggctacttatcgagcggctatcgtgcaaaatcagcattta
gctttactcgccaagaagttgcacttagaggagtacatgctgtacgcacatggttcggac
ttatgtcacgaattggaattgcgtcatgcaatggctaactgctttgaggctttaatgggt
gcgctgctactcgatggtggcatatcaatagccgatgaggtgtttatgaacgcgctttat
atggaaaacgagcaactaaaagagatttggaagaattatccagaacatccgctgcaagag
caagagccgttaggcgatcgcggttgtatttcctcatatccggtgctgcaggagttaacc
aaattcgaagaatccatcggcatacagttcaaacacatacgtctactggcacgcgctttc
accgatcgttccattggttttacgcacctcacattgggttccaatcagcgtttggaattt
ctgggcgatacggtgttgcaattaatttgctccgaatatctttatcgccattttcccgag
catcacgaaggtcatttgtcgttgttgcgttcatcgcttgtgaataatcgcacacaagcg
gtggtttgtgatgatctcggcatgaccaagtatgcggtctactcgaatccaaaggtggag
ctaaagactaaagatcgtgctgatttattggaagccttcttgggtgcattatatgtggat
aaaggtttgctgtattgtgaacaattctgtcatgtgtgtctatttccacgtttgcaaata
tttattatgaatcaagattggaacgatcccaaatcgaagttgcaacaatgttgtttgact
ttgcgcacaatggagggtggcgaacccgatatacccatttacaaagtaatcgagtctatc
gggcccaccaatacccgcgtgtatacggtagctgtttatttccgttcgaaacgcttggca
accgctaccggctcatcgattcagcaggctgaaatgaatgcagccaaacaagctttggag
aattcacgtgatttattcccacaattggatcatcagaaacgtgttatagccaaaagtatt
aaaaagcaaaagggtggcgagctcaaaccggaatttgaagagaccttaaccgaacaaacg
aagccgaaaagtacgaattccatggaagatgagtcacatcttcccaagcaatatcgtgta
cgtgaagacatttccagcgatgaactgccagacgatgatagtgatgtggaggatcgacag
accacatccataagcatccaaggtcagtcaagtcaaagcagtgatagcagcaccagttca
gatgatgagcagttggaaaaatctcgcacacacaaaaagcgaagcagaaaacgtgttaaa
aaaacatcgcaaaacagggcgaattcgaattcgcccaaaagagcaaatctcgaaatggac
gatatgaaaagcgcgaataaaagaaattgtgaagatgtatcgagtgatgattgctttgaa
gaaaatttaaccatcccggtgcccagtacgagcgaaaatacgaagtcatctttaaatgca
atgccgcatgatctgcaagatttggtggaagatgtctcgtcgaattcggatattgagtcg
ggagaactgagtagttaa
DBGET
integrated database retrieval system
