Bactrocera dorsalis (oriental fruit fly): 105229614
Help
Entry
105229614 CDS
T09719
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33
KO
K15542
polyadenylation factor subunit 2
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Pathway
bdr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105229614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdr03019
]
105229614
Messenger RNA biogenesis [BR:
bdr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105229614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
eIF2A
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_WDR41
PEP5_VPS11_N
Beta-prop_WDR11_2nd
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_SPT8
Tricorn_2nd
WDR54
Motif
Other DBs
NCBI-GeneID:
105229614
NCBI-ProteinID:
XP_011208320
UniProt:
A0A034W2Z4
A0A6I9VEW6
LinkDB
All DBs
Position
2:88541213..88548256
Genome browser
AA seq
868 aa
AA seq
DB search
MEFQQLTLPQTDVSQPPPQLTAPSALATNATLLPSQSGGGSSYGSHHRNHYHPHHGGSGK
PGHPYFKPFNPGGFQRPFGMTQDDFDGKRLRKSVMRKTVDYNASIVKALETRLWTRDHRD
RHAPQPENIYVPELLPPSSYLDNPSNAVTTRFVKTATNKMRCPIFTLAWTPEGRRLVTGA
SSGEFTLWNGLTFNFETILQAHDVPVRTMVWSHNDSWMVTGDHSGYVKYWQSNMNNVKMF
QAHKEAIRGISFSPTDSKFVSCSDDGTLRIWDFLRCQEERVLRGHGADVKCVHWHPQKGL
IVSGSKDNQQPIKLWDPKSGSALATLHAHKSTVMDLKWNDNGNWLVTASRDHLLKLFDLR
NLREEMQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNVGTDKEIGCVETAHDSIV
WTLAWHPLGHILCSGSNDHTIKFWTRNRPGDLMRDKYNLNTLPASLAAMDDCEYDDAVIP
GMGPEDKVEFTESLTADKGFIPGLDLDPSRMGDRDREKKVPYSKPIPRNFQAQWAGSRRP
DESSFHDELAMREPKDTSGLSHQQISESTIEGMLASGVLTTMDPQAIVGLLVYNRFIRVH
PDSRVMVAIRQGPDYLNKYIDAGKLDELRDVVPIRDRSRSLSPTLEGRESSPPSKRSRFE
PRQHSAQLVSVRELLSLKKPFLPCLLQMKSQQAPQKSEYEDDVRDSLTPQAQAQPQPQQQ
QQQTYQQQPQHQSPMQQQQSRPSPWAVGPPFQQQQQPPQQNPWSTSPMGSGSSCGSNLGP
PPNQNGYNGNNGPYNGPSFNDSMNYGDNMFPKGGGGPGPDENNGMHMSNMNMNNNMGNNY
GNQRRGNRRGGGGGGGRNRGGRNNNRRF
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggaattccaacaacttacactaccacaaacagatgtctctcaaccgccacctcaattg
acagcaccgtcggcgctagcaacaaatgcaacattactaccttcacaatccggaggtgga
agctcatatggctcacatcaccgtaatcactaccatccacatcatgggggttctggaaag
ccaggccacccatattttaagccattcaaccccggaggctttcaacgaccttttggcatg
acgcaagatgattttgatggcaagcgtctaaggaaaagtgttatgcgaaaaaccgttgat
tacaatgcttccattgtaaaagcgttagagacacgtctttggactcgtgaccatcgtgat
cggcatgccccacaacccgaaaatatatacgtgcccgaacttttaccaccgtccagttac
ttggataatccctcaaatgcagtgactacacgttttgtcaaaactgccacaaataaaatg
cgttgcccaatttttacactcgcttggacacctgaaggtagacgtttggtgacaggcgcc
agttcaggtgaattcactttatggaatgggttgacattcaattttgaaactatattgcaa
gctcatgatgttccagtacgtacaatggtatggtctcataatgacagctggatggtgact
ggtgatcattcgggctacgtcaagtattggcagtcaaatatgaataacgtgaaaatgttt
caggcacacaaggaggcgattaggggaataagcttcagtccgacggatagtaaatttgtg
agctgcagcgatgatggtacactccgtatatgggattttttgcgctgtcaggaggagcgt
gtcctgcgaggccatggtgcagatgttaaatgtgtgcactggcacccacagaagggtctg
attgtgtcgggcagtaaggataatcagcagccaataaagttgtgggatccaaagagtggt
agtgcgttagctacactgcatgcgcacaaatcgactgtgatggatttgaagtggaatgat
aatggtaattggctagttaccgcatcccgtgatcatttgctcaaactttttgatttgcgt
aatttacgtgaagagatgcaagtttttcgtggccacaaaaaggaggccagctccgtatcg
tggcatccaatacatgagggtctcttctgctcaggcggctccgatggctccatactcttc
tggaatgtgggtaccgataaagagattggctgtgtagagaccgctcatgacagtatagtc
tggacactggcttggcatccgttgggtcatatactttgctcaggctccaatgatcacacg
atcaagttttggacacgaaatcgccccggtgatttgatgcgtgataagtataatttgaac
acgttgcccgcgagtttggcagcaatggatgattgcgaatacgatgatgctgttattcct
ggtatgggtcctgaggacaaagttgaatttacggaaagtctcactgccgacaaaggcttt
attcctggtttggatttggatccttccagaatgggtgatcgtgatcgggagaaaaaagta
ccatacagcaaacctataccgcgaaactttcaggcccaatgggcaggttcacgtcgccct
gacgaaagtagctttcatgatgagctggcgatgcgtgagccaaaagacactagcggtttg
tcacatcaacaaattagcgagagcacaattgagggaatgttggcgagtggtgtgctcacc
accatggatccgcaagcaattgttggactgctcgtttacaatcgattcattcgtgtacat
ccggactcgcgtgtaatggtcgccatacgacagggtcctgattatttgaacaaatatatt
gacgcgggtaaattggacgaattgcgtgatgttgtgcccattcgcgatcgatcgcgttca
ttgtcgcctaccttggagggacgtgaaagttcaccaccatcgaaacgatcccgctttgaa
ccgcgccagcatagtgcccaacttgtatctgtgcgcgaactgctaagtcttaagaaaccg
tttttgccttgtctgctacagatgaagtcacaacaggcaccacaaaagtccgagtacgaa
gatgatgtgcgcgattcgcttacgccgcaagcgcaagcgcaaccgcagccgcaacagcaa
cagcaacagacttatcagcaacaaccacaacaccaatccccaatgcaacagcaacagagt
cggcccagtccatgggcagtggggccgcctttccaacagcagcaacaaccaccacaacag
aatccttggagcacatcgcctatgggaagtggttcgagttgtgggtcgaacttggggcca
ccgcctaatcaaaacggttataatggtaacaatggtccgtataatggaccgagttttaat
gatagcatgaattacggggacaatatgttccctaagggcggtgggggtcctggtcctgac
gaaaacaatggtatgcacatgagtaatatgaatatgaataacaatatgggtaacaactac
ggaaaccagcgtcgaggcaatcgacgtggtggtggtggaggcggtggccgtaatcgtggc
ggacgaaataataacaggcgattttag
DBGET
integrated database retrieval system
