Bactrocera dorsalis (oriental fruit fly): 105230192
Help
Entry
105230192 CDS
T09719
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Pathway
bdr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105230192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdr03041
]
105230192
Spliceosome [BR:
bdr03041
]
Complex A
U1 snRNP components
U1 related factors
105230192
Complex B
105230192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
105230192
NCBI-ProteinID:
XP_011209121
UniProt:
A0A6I9VXW6
LinkDB
All DBs
Position
3:1390238..1393763
Genome browser
AA seq
813 aa
AA seq
DB search
MNVPPGAAGGAVPPPMGMPPMFNIPPPGFGGPPPPELAAAFGGIPPNTEWTEHKAPDGRP
YYYNNNTKQSSWEKPEALMTPAERLTHQCPWKEYRSDAGKVYYHNVNTKESRWEPPPEFV
EMQAKVKAEEAAAAAKAVAAMTSSSLAGMVPPAALASILPATLPTVVNIATPDIRSPMTP
GSNENSSSALDQAMAATLASIEMPQTGKEEKENNKKESPTEEPKIVFKDKKEAIEAFKDL
LREKNVPSNANWDQCVKIISKDPRYSSFKNLNEKKQTFNAYKTQKLKDEREESRLRAKKA
KEDLERFLMSTDKMNSQMKYYKCEELFASNKIWTSVPEQDRRDIYDDCIFNLAKREREET
RLLKKRNMKVLGELLESMTTITYETTWAQAQLMLLQNAAFKNDVNLLGMDKEDALIVFED
HIRSLEKEEEEEREREKKRLKRQQRKNRDSFLSLLDAQHEAGKLTSMSLWVELYPIISAD
LRFSAMLGQPGSTPLDLFKFYVEDLKARYHDEKKIIREILKEKQYLVQANTSFEEFATVV
CEDKRSANLDAGNVKLTYNALLEKAEAVEKERLKEETRRLRKLENEIKAEWQEANISVQE
PYEAAKKLVEHLEAFTVYEKEVGVKKIWEDYIKESEDACSHHHSRSRKSKKNKKHKKRVR
SSSKSDIENDQDEFEPAKSKKRKSHSRSHSISSSLSMESERISKKKKKRKSKKTSRASSC
ESERVISSPIASPTTSQLDDITVSRKKKRDKKSKKEKKHHRSITPISANGSNQSDVENSG
TSSRNAEEQALSETELESKRAALLAQLNEQMED
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtacctccgggagcggcgggtggtgcagttccgccaccaatgggcatgccgccg
atgtttaacataccgccaccaggtttcggagggccacctccaccagaactggcggcagca
ttcggtggtataccgcctaatactgaatggactgagcacaaggcccccgatgggcgacca
tattactacaataacaatactaagcaaagctcatgggagaagcccgaggccctgatgaca
ccagctgaacggttgactcaccaatgtccttggaaggagtatcgttctgatgctggtaaa
gtgtattatcacaatgtcaacacaaaagaatcacgttgggagcctccaccagaattcgta
gaaatgcaagctaaagtcaaagcagaagaagctgctgctgctgccaaagccgttgctgcg
atgacatcttccagtttggcgggaatggtgccaccggctgctttagccagtatacttccg
gcaactctacccaccgtggtaaatatagctacacctgatatacgttcacctatgacccca
ggcagtaatgaaaattcttcatccgcccttgatcaagccatggctgctacactagcttca
attgaaatgccacaaactgggaaggaagagaaggaaaacaataaaaaagaatcacctacg
gaagaacccaaaatagtatttaaagataaaaaagaagcaattgaagctttcaaagattta
ctgcgggagaaaaatgtaccatcaaatgcaaattgggaccagtgcgtcaaaataatttcc
aaagatccgcgttatagttcctttaaaaatttgaacgaaaagaaacaaacatttaacgca
tataaaacacaaaaactgaaagatgaacgagaagaatcgcgtttacgcgcaaaaaaagcc
aaggaggaccttgaacgtttccttatgtcaactgataaaatgaactcgcaaatgaaatat
tataaatgcgaagagttatttgcgtccaataaaatatggaccagtgtgccggaacaggat
cgtcgtgacatttacgatgactgtattttcaacttggctaagagggaaagggaggaaacg
cgtttactaaaaaaacgaaatatgaaagtattgggcgagttactcgagtcgatgaccaca
atcacttacgaaactacatgggcgcaggcgcaactcatgctgcttcaaaatgccgccttt
aagaatgacgttaatttacttgggatggacaaagaggatgcgctcatagttttcgaggat
catattcgatcattagaaaaagaagaagaggaggaacgtgaacgcgagaagaagcggctc
aaacgtcaacagcgcaaaaaccgagattcatttttatccttattagatgcacaacatgaa
gctggaaagcttacatcaatgtcgctttgggtagagctgtatccaataatatcggcagat
ttgcgtttttcagctatgctcggtcagccgggttctacgcccttagatttattcaaattc
tatgtggaagacctaaaggcgcgctaccacgatgaaaagaaaatcatacgcgagatactc
aaagaaaaacaatacttggtgcaagcaaatacttccttcgaggaatttgctactgttgtg
tgtgaagacaaacgctctgcaaatttagacgcgggcaatgtcaaattgacatataatgct
ctgcttgaaaaggccgaagccgtcgaaaaggagcgtctgaaagaagaaactcgccgtttg
cgaaaattggaaaacgaaatcaaagcggaatggcaagaggcaaatatttctgtacaggaa
ccttacgaagctgcaaagaagttggtggaacatttagaagcattcactgtttatgaaaag
gaagtcggtgtgaaaaagatctgggaggactatattaaagaaagcgaggacgcctgcagt
catcatcattcccgttcgcgaaaatcgaagaagaacaaaaaacacaagaagagagtgcgc
tccagttctaaatcggatattgaaaatgatcaagatgaatttgagccggcaaaatcaaaa
aaacgaaagtcccattcacgttcgcattcgattagttctagcctcagcatggaaagtgaa
cgcatatcaaagaaaaagaagaagcgaaagagcaaaaaaacctcacgagcttcttcctgc
gaatctgaacgcgtcatatcctcgccaattgcttcgccaaccacttcacaattggatgat
attacagttagcagaaagaaaaaacgcgataaaaagagcaagaaagaaaagaaacatcac
cgttccattacaccgataagtgcaaatggtagcaatcagtccgatgttgaaaattcgggt
actagttcgcgtaatgctgaggaacaagcgctaagcgaaaccgaactggagtcgaaacgc
gccgcattattagcacaattgaacgaacaaatggaagattga
DBGET
integrated database retrieval system
