KEGG   Bactrocera dorsalis (oriental fruit fly): 105230994
Entry
105230994         CDS       T09719                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
bdr  Bactrocera dorsalis (oriental fruit fly)
Pathway
bdr03013  Nucleocytoplasmic transport
bdr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bdr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105230994
  09122 Translation
   03013 Nucleocytoplasmic transport
    105230994
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bdr03019]
    105230994
   03041 Spliceosome [BR:bdr03041]
    105230994
Messenger RNA biogenesis [BR:bdr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     105230994
Spliceosome [BR:bdr03041]
 Complex C
  Other components
   EJC/TREX
    105230994
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    105230994
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_Aladin ANAPC4_WD40 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_RIG_2nd Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_NOL10_N Tricorn_2nd Beta-prop_Vps41 WD40_MABP1-WDR62_2nd eIF2A Beta-prop_EML Beta-prop_HPS5 RMC1_N WD40_MABP1-WDR62_1st DSE1_N Beta-prop_WDR36-Utp21_1st WDR90_beta-prop_4th NBCH_WD40 Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st Beta-prop_TEP1_C PD40 Beta-prop_SCAP Beta-prop_EIPR1 WD40_RFWD3 PAC11 TRM82_WD Beta-prop_NUP159_NUP214 Beta-prop_ELP1_1st Beta-prop_DCAF12 B-prop_COPA_B_2nd Peptidase_S9_N DPPIV_N Beta-prop_WDR41 Beta-prop_Nup120_160 baeRF_family5
Other DBs
NCBI-GeneID: 105230994
NCBI-ProteinID: XP_011210361
UniProt: A0A034VJH6
LinkDB
Position
2
AA seq 321 aa
MGQSNMSLEDLKAYFKTHGKIREQKAHTSKVHSVGWSCDGRRLASGSFDKTVAVYTLERD
RVSKENTYRGHTGSVDQLCWHATNADLLSTASGDKTVRIWDIRAGKCSTVTNTKGENINI
TWSPDGKTIAVGNKEDLVTFIDTRTNKIRAEEQFNFEVNEIAWNNTSDLFFLTNGMGCVH
ILSYPSLELQHVLKAHPATCICIEFDPTGKYFATGSADALVSLWDANELACLRVLSRLDW
PVRTISFSHDGKLLASASEDLLIDIAHTETGEKVADVTVDAATFTVAWHPKQYLLAYACD
DKDGNDRRREAGNLKVFGFSE
NT seq 966 nt   +upstreamnt  +downstreamnt
atgggacaatccaatatgtctttagaggatttgaaagcgtacttcaagacacatggaaaa
attcgggagcaaaaggcgcacacatcgaaggtacattctgtaggctggagttgtgatggc
agacgtttggcttctggttcctttgacaaaacagtagcagtatatacgcttgaacgcgat
cgtgtgagtaaagagaatacctaccgtggtcataccggttctgtggatcagctttgctgg
catgcaacaaatgcagatttgctcagcacggccagtggtgataaaactgtgcgtatttgg
gacatacgcgctggcaaatgctccaccgtcacgaatacaaaaggtgaaaatataaatatc
acatggtcacctgatggcaaaactatagcagttggtaataaagaagacctggtgacattc
attgatacgcgcacaaataaaatacgcgctgaggaacagtttaactttgaggtgaatgaa
attgcatggaataatacaagtgatttgtttttcttgacaaacggtatgggttgtgtgcac
atcttaagctatccgagtctagaattgcagcacgtgctgaaggcacatcctgctacttgc
atttgcattgaatttgatcccactggtaaatacttcgctaccggttcagcagatgcgctc
gtttcactttgggatgcaaacgaattagcctgtttgcgcgtgctatcacgcctagattgg
ccggtacgcacgatttcctttagtcacgacggtaaactattggcatcggctagcgaggat
ttgctcatcgatatagcgcatacggagacaggcgagaaagtggctgatgtcacagtcgat
gcagcaactttcactgtagcatggcatcccaagcaatatttactcgcatatgcgtgcgat
gataaagacggtaacgaccgaaggcgtgaagcgggtaacctcaaagtttttgggttttcg
gagtaa

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