Bactrocera dorsalis (oriental fruit fly): 105231505
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Entry
105231505 CDS
T09719
Name
(RefSeq) 5'-3' exoribonuclease 2 homolog
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Pathway
bdr03008
Ribosome biogenesis in eukaryotes
bdr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105231505
09123 Folding, sorting and degradation
03018 RNA degradation
105231505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdr03021
]
105231505
03019 Messenger RNA biogenesis [BR:
bdr03019
]
105231505
03009 Ribosome biogenesis [BR:
bdr03009
]
105231505
03016 Transfer RNA biogenesis [BR:
bdr03016
]
105231505
Transcription machinery [BR:
bdr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105231505
Messenger RNA biogenesis [BR:
bdr03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
105231505
Ribosome biogenesis [BR:
bdr03009
]
Eukaryotic type
Pre-60S particles
RNases
105231505
Transfer RNA biogenesis [BR:
bdr03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
105231505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-FCS
Motif
Other DBs
NCBI-GeneID:
105231505
NCBI-ProteinID:
XP_011211129
UniProt:
A0A6I9VDW9
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All DBs
Position
2:complement(99333167..99336198)
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AA seq
881 aa
AA seq
DB search
MGVPAFFRWLSKKYACVIVDCVENKNLDPNTGQTIYEDATLPNPNGIEFDNLYLDMNGII
HPCTHPEDKPAPKNEDEMMVAIFECIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRRF
RAAKETNEKRMEIQKIRDELLVKGYILPPEKTDEEHFDSNCITPGTPFMDRLSKCLHYYI
HDRMNTNPAWKGIKVVLSDANVPGEGEHKIMDYIRKQRAQPDHDANTQHVLCGADADLIM
LGLATHEPNFTIIREEFLPNKPRPCDICKQYGHEMQKCVGLGNASGSKDESFKPDVPINA
EVRFIFVRLSVLREYLKKTLEMPNIPFKYDFERALDDWVFMCFFVGNDFLPHLPSLEIRE
GAVDRLVELYKKCVYKTGGYLTNSGEVNLQRVQMILTDLGNVEDNIFKERQRRELVFKAR
QKRQRENEYKAESLGVSSFFQPTAVNRGASNSQQAFNYKEEAVKLRTQNNKGVKRTAAEA
GLDNDSDENDNDEVRLHEAGFKNRYYESKFDVGTNNQSFRYSVALQYVRGLCWVLKYYYQ
GCASWDWYFPYHYAPFASDFVNITGLSTSFDKGTKPFNPLEQLMGVFPAASSSHVPKPWA
TLMSDPDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDERRLFKALKPFYKKLTEEEVR
RNKRGDNRLYIGQLHHKFEWLKHQLKSLNSMDKEIKVVLDGMAGSILKAEDNIKISGTLK
SPINGLTDIMSNEIITFRFRDPEYDSDFIFPAIRLTNAIDPPNVLNSRSEGQSGHNRPVI
GFNRNLPTGHLSAGGHRMVQASLGRNSFNMGGNNRGHYPRGPNPQQNFQSRSGYNNFQNN
HGNNFPGGNNYRNHQQNPHRGGHQNNRFQRYNPYGQPNNRF
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgggagttccggcattttttagatggttaagtaagaaatatgcatgtgtcatcgttgat
tgtgtagaaaacaagaatttggatccaaacaccggacaaacaatatacgaggacgctaca
ctaccaaaccctaatggaattgaatttgataatctttatttggatatgaatggtattata
catccatgcacacatcctgaagataagccagccccgaaaaatgaagatgaaatgatggtc
gcgatatttgaatgcattgacagattgtttggtattgttcgccctcgaaaattattatat
atggcaattgatggtgtagcgccaagggcgaaaatgaatcaacagaggtcccggcgcttc
agagctgctaaggaaacaaatgaaaaacggatggaaatacaaaaaattagagacgaactt
ttagtcaagggatatatacttccacctgaaaaaactgacgaggaacacttcgattccaat
tgtataacaccaggtacaccttttatggacagattaagtaagtgtttacattattatata
cacgaccgtatgaacacaaacccagcttggaaaggaataaaagtagtattgtcagatgcg
aatgtccctggtgaaggtgaacacaaaataatggactatattcgaaaacaaagggctcaa
ccagatcacgatgccaatactcaacatgtactttgtggtgcagatgcagatttgattatg
ttaggacttgctactcatgaaccgaatttcacaatcatacgagaagagtttctaccaaat
aaacctcgcccatgtgatatatgtaaacaatatggacatgaaatgcagaagtgtgtaggg
ctaggaaatgcaagtgggtcgaaagatgaaagctttaaacctgacgttcccataaacgct
gaagttagatttattttcgtaagattgagtgttcttcgagaataccttaaaaagacatta
gaaatgcctaatataccatttaaatatgattttgagcgtgctttggatgattgggttttt
atgtgcttctttgttggaaatgactttttaccacatttaccaagtcttgaaattagagaa
ggcgcagtggatcgcttggtggaattgtataaaaaatgtgtatataagactggtggctat
ttaacgaattcaggagaagtcaatctccaacgtgttcaaatgattctaacagatttgggt
aatgttgaagataatatatttaaagagagacaacgccgagagctggtatttaaggcaagg
cagaagcgccagcgagaaaacgaatataaagctgaaagtcttggtgtgtcctcatttttc
caaccaacagcggtaaatcgaggagcatcgaattcacaacaagcatttaactataaagaa
gaagctgtaaaattgagaactcaaaataataaaggtgttaaaagaactgctgcagaagca
ggtcttgataacgattctgacgaaaatgacaatgacgaggttagattacacgaggctggt
ttcaaaaatcggtattacgaatcgaagtttgatgttggaactaataatcaaagctttcgg
tattcagttgctttgcaatatgtgcgtggactttgttgggttctaaaatattattatcaa
ggttgtgcttcatgggattggtattttccataccattacgcaccatttgcatccgatttt
gtgaatattactggcttatcaaccagttttgacaaaggcacaaaaccgtttaatccatta
gaacagttgatgggagtatttcccgccgccagctcttctcatgttccaaaaccatgggca
acattaatgtctgatccagattcaccaattatcgatttttacccagaggactttaaaatt
gatttaaatggaaaaaagtttgcttggcaaggagtagctttactgccttttgttgacgag
cggaggctttttaaagcacttaaacctttttataaaaaactaacagaggaagaagtccgg
cgaaataagagaggcgacaaccgtttatatattgggcaattgcatcataaatttgaatgg
ttgaaacatcaattaaaatcacttaattctatggacaaagaaattaaggtggttttggat
ggaatggctggaagtattttaaaagcagaagataacataaaaatctcaggcacattaaaa
tccccaataaatggtttaactgatataatgtcgaacgaaattataacctttcgttttcgg
gatccagaatatgacagtgattttatttttcctgccatacgtcttactaatgcaatagac
cctccaaatgtcttaaactctagatcagaaggtcagtctggtcacaatagaccagttatt
ggtttcaacagaaacctcccaactggacatttaagtgccggtggacacagaatggtccaa
gccagtttgggaagaaactcttttaacatgggtggaaacaatcggggacattatccgcga
ggaccaaatcctcaacagaattttcaatctagatctggttacaacaattttcaaaacaat
catggaaacaacttccctggtggcaataattacagaaaccaccaacaaaacccacataga
ggcgggcaccaaaacaatagatttcagaggtataatccatatggacagcccaacaataga
ttttaa
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