Bactrocera dorsalis (oriental fruit fly): 105232198
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Entry
105232198 CDS
T09719
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Pathway
bdr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105232198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdr03021
]
105232198
Enzymes [BR:
bdr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105232198
Transcription machinery [BR:
bdr03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
105232198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_binding
Motif
Other DBs
NCBI-GeneID:
105232198
NCBI-ProteinID:
XP_049312613
UniProt:
A0A6J0RPD5
LinkDB
All DBs
Position
4:complement(7967133..7976313)
Genome browser
AA seq
1377 aa
AA seq
DB search
MPKEQFREADVIKKISHVQFCISSPEEIQQESHLRIVSKNLYQGQREPVPYGVLDKRMGV
SSKDATCDTCGQGLNECIGHFGYLDLALPVFHIGHFRSTISILQMICKSCSHVMLREVDK
RIYEKKLLNPNLSYLAKKSLHGQILNKAKKQTKCPNCEAPNGGVKKGPGLLKILHDPCKG
KKPDALMTDALNELLQATENNRELQQMLTSYNQVEELNPLTVLELFKTIPKNDIPLLGMT
SDDASPANLIVTRVFVPPVCIRPSVLSEVKAGTTEDDLTMKQSEILLINDVIQKHMTGGG
KIELIQEDWDFLQLHVALYFHSEISGIPLNMAPKKTTRGIVQRLKGKQGRFRGNLSGKRV
DFSGRTVISPDPNLMIHQVGVPERVAKILTYPERVNPANIQKMKELVKNGTQKHPGANYV
QQRGSTFKKYLAYGNRDKVAHDLKCGDIVERHLCDGDIVLFNRQPSLHKMSIMCHQAKVQ
PQRTFRFNECACTPYNADFDGDEMNLHLPQTEEARAEALILMGNKSNLITPKNGEILIAA
TQDFITGGYLLTQKDEFLTKEQAMQLAACFLAGPDANMRIDMPPPAILKPRKLWTGKQIF
SLLLRPNKECPVMANLITKGRNYTSNYDLCIRDSWVIIRNSELICGSMDKSTLGSGTKNC
IFYVILRDFGELYATKCMWRLARIASYFIQNRGFSFGISDVTPSNKLLEEKQKLLENGYA
KCNEYILEMKKGTLQCQPGCTPEQTLEAVMLRELSSIREQAAKACFRELHPTNSALIMAL
SGSKGSNINISQMIACVGQQAINGKRVPNGFENRALPHFEKFSAIPAARGFVQNSFYSGL
TPTEFFFHTMAGREGLVDTAVKTAETGYLQRRLVKCLEDLVVHYDGSVRNAIGEIVELIY
GGDGLDPVFMEVKNKPVDLVRQLNHLRATVPDRKSTPQAAADISPVVRKILTEDEFTMSR
KDFQSEIITFIEKVAQKIANVQAKYRRHPKLANEIERLTEEQIRTFMRWVNDKYNRAVTE
PGTAVGAVAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIVEIINATKTISTPIITAE
IENNTSMEFARKVKARIEKTTLGEISSYIEEVYRPDDCFLVIRLDLNRIKVLGLEINAET
VRYSICTSKLRIKPALVDVVGSSVITVHIDTSKHGATLNAELQRLTISIQNVVVAGLPNI
SRAVIAIDDAHTPATYKLCIEGAGLRDVMATFGVVGAHTKSNNIWEVYNTLGIEAARTTI
MTEITDVMEGHGMSVDHRHIMLLASQMTSRGEVLGITRHGLAKMRESVFNLASFEKTADH
LFDAAYFGQTDAVDGVSERIILGMPASIGTGLFKLIHNHEDTALPEVEPPLFHAVSA
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaagagcaatttcgtgaagctgatgtgatcaaaaaaatctcccatgtgcagttt
tgtatcagcagtcccgaagaaatacaacaggaatcacatttgcgcattgtttccaaaaat
ctgtaccagggacaacgcgagccggtgccctatggcgtgctggataaacgtatgggtgtg
agctcgaaagacgccacctgtgacacatgcggccaaggcctaaatgaatgtatcggtcat
ttcggttatttggatcttgccttgccagtattccatattggacacttccggtcgacaata
tcaatcttgcaaatgatttgtaaaagctgctcgcatgttatgcttcgtgaagtcgataag
cgtatatatgagaaaaaattacttaatccaaatctatcatatttagcaaagaaatctttg
catgggcaaatattaaacaaagcaaagaaacagacgaaatgccctaattgtgaagcaccc
aatggcggtgtaaagaaagggccaggtttattaaaaattctgcatgatccctgtaagggg
aagaaaccggacgctttaatgaccgatgcgctaaatgaattgctgcaagcaactgaaaat
aatcgcgaattgcaacaaatgctgacgtcatacaatcaagttgaggagcttaatccttta
accgtattggaattattcaaaacaataccgaaaaacgatataccacttttgggtatgact
tctgacgatgccagtccggcaaatttgatcgtgacacgtgttttcgtgccaccggtatgc
atacgtccctctgtgctgtccgaggtaaaagcaggcaccaccgaagatgacttgaccatg
aagcaaagtgaaattttacttatcaacgatgttatacagaaacatatgacgggtggtggc
aaaattgagctcattcaagaagattgggattttttacaacttcacgttgcgctatacttt
cacagtgaaatttctggtattccactaaatatggcacccaagaagaccacacgcggcatt
gttcaacgtttgaaaggcaaacagggccgatttcgcggtaatctctctggcaaacgtgtg
gacttctccggccgtaccgtaatctcaccagatcctaacctcatgatacaccaagtaggt
gtacctgagcgtgttgctaaaatacttacctatccggaacgtgtaaatcccgctaatata
caaaaaatgaaagagttggtgaaaaatggcacacagaagcatccgggtgccaattatgta
caacaacgtggctccacattcaaaaagtatcttgcttacggcaatcgtgacaaagtagcg
cacgacttaaagtgtggtgacatagtggaaaggcatttatgcgatggcgatatagtgctc
ttcaatcgccaaccatcactacataaaatgtcgattatgtgtcaccaagctaaggtgcag
ccacaacgtacattccgtttcaacgagtgtgcttgtacgccatataacgcagatttcgac
ggcgatgaaatgaatttacacttgccacaaacggaggaggcgcgtgcagaggcgctaata
ctaatgggcaataaatcgaatctgataacaccgaaaaatggtgaaatactcattgcggca
acacaagatttcataactggtggctatttgctcacgcaaaaagatgaatttctgaccaag
gagcaagcaatgcaattagctgcatgctttctagccggacccgatgccaatatgcgcatc
gatatgccgccaccggcaatattgaagccacgaaaactctggacaggcaagcaaatattc
agtctactattacgtccgaacaaagaatgtccggtgatggcgaatttgataaccaaaggc
cgtaattatacatctaactatgatctatgtatacgagattcgtgggtgattatacgtaac
tcggagctaatttgtggttcaatggataaaagcactttgggttcaggcaccaaaaactgc
atattctatgttatactccgtgactttggtgaactatatgctaccaaatgcatgtggagg
ttggcaagaatcgcttcatatttcatacaaaatcgtggcttctccttcggcatcagcgat
gtaacacccagcaataagttgttggaggaaaaacaaaagctattagaaaatggctatgcc
aaatgcaatgaatacattttggaaatgaagaaaggtacactacaatgtcaaccaggttgt
acaccggaacaaacattggaggcggtaatgctgcgtgaactgtcttctatacgtgaacag
gcagctaaagcttgcttccgtgagctgcatcccactaatagtgcacttattatggcgctg
tccggttccaagggctccaacatcaatatatcacagatgattgcttgcgtcggccaacag
gctatcaatggcaagcgtgtgccaaatggatttgaaaatcgtgctctgccacatttcgaa
aaattctccgccataccggcagcacgtggtttcgtacaaaatagtttctactcgggtctg
acccctacggaatttttctttcatactatggctggacgtgagggtttggtcgatacggct
gtgaaaacggccgagactggttatttgcagcgtcgtttggtgaagtgcctggaagatctg
gttgtacactacgatggatctgtacgtaatgctataggtgaaatagttgagttgatatat
ggtggcgacggcctagaccccgttttcatggaagtcaaaaataaacctgtagatttggta
cgtcaactaaatcatttgcgcgccaccgtgcccgatcgtaaaagcacaccgcaagccgca
gcggatatttcaccagtagtgcgtaaaatactcaccgaggatgaattcaccatgagtcgc
aaagattttcaaagcgaaattatcacatttatcgaaaaagtcgcgcaaaaaatcgccaat
gtacaagccaaataccgacgtcacccgaaattggctaacgaaattgaacgcctgactgag
gaacaaattcgcacatttatgcgttgggtcaatgacaaatacaatcgtgctgtaactgaa
cctggcactgctgtgggcgctgttgcggcgcaaagtattggtgagccgggcacacagatg
acattgaaaactttccattttgctggtgtcgcgtcgatgaacattacacagggcgtgcca
cgtattgtcgaaattattaatgctacaaaaaccatttcaacgcctattataactgctgaa
attgagaataacaccagcatggagtttgcgcgtaaagtgaaggcgcgcattgagaagact
acgctcggcgagatttcatcttacatcgaggaggtctacaggccagatgactgtttctta
gttatacgcttggatttaaaccgcataaaggttttaggtttagagattaatgccgaaaca
gtccgttactccatctgtacatcgaagctgcgcatcaaaccggcgttagtagatgttgtc
ggctcttcagtaataaccgtacacattgatacctccaaacatggcgccacactcaacgcc
gaactgcaacgcctcaccatatccatacaaaatgtcgtcgttgctggtttgccaaatatt
tcacgcgctgtcatcgctattgacgatgcacacacgccggccacatataaactttgtatt
gagggcgcaggcttacgtgatgttatggccacttttggtgttgtcggcgcacacaccaag
agcaacaatatctgggaagtttataatacgttgggtattgaggctgcgcgcaccaccatc
atgacggaaatcacggatgtgatggaaggccatggcatgagtgttgatcatcgtcatatt
atgctgctggccagtcagatgacgtcgcgcggtgaagtgttgggcataacgcgacatggt
ttggccaaaatgcgtgaaagtgtcttcaatctggcttcgtttgaaaaaaccgccgatcat
ttattcgatgccgcctactttggtcaaacggatgccgtggatggtgtctccgagcgtatt
atactgggcatgcccgcctccattggtaccggactctttaaacttatacacaatcatgag
gacaccgcattgccagaagtggaaccgccattatttcatgctgtatcagcgtga
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