Bactrocera dorsalis (oriental fruit fly): 105232436
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Entry
105232436 CDS
T09719
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Pathway
bdr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105232436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdr03019
]
105232436
Messenger RNA biogenesis [BR:
bdr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105232436
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
105232436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
105232436
NCBI-ProteinID:
XP_011212415
UniProt:
A0A034WXZ5
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Position
1:complement(5712848..5713795)
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AA seq
249 aa
AA seq
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MSNFELLSEQGLRLDGRRPHELRCIKCKLGVFEQPDGSAYLEQGNTKVLAAVYGPHQAQS
NKLDLNEVVINCQYSMATFSTAERKNRPRGDRKSQEITLYLRQALRAAIKTELYPRSQID
VYVEVLQADGANYAVALNAATLALVDAGICLKEYVVACTASLSKNNIPLTDVSHVEEMSG
GPTLTVASLPTSNKIAFMEMSQRFHLDNLPAVMEQALNGCREIQAIMEKEVRKHLMQMGS
AGDWSNIAK
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtctaattttgaattacttagcgagcagggtttacgtcttgatggtcgtcgccctcat
gaactccgttgtatcaaatgtaaactcggtgtatttgaacaacctgacggtagcgcctat
ttggaacaaggtaacacaaaagtgcttgccgcagtttatggccctcatcaggcgcaaagt
aacaaacttgatcttaatgaagtggttataaattgtcaatatagtatggcgacattttct
actgcggaacgtaagaacagaccacgtggggatcgtaaatcacaagaaattacactttac
ctacgacaagcattgagggctgccataaagactgagttatacccacgttcacaaattgac
gtatacgtagaagtgttacaagcagatggtgctaattatgccgttgctctaaatgccgcc
acccttgcgcttgtcgatgctggtatttgtcttaaggaatacgttgtggcatgtaccgcg
tcattgagtaaaaacaacataccccttacggatgtttcgcacgtggaagagatgtcagga
ggacccacattaaccgtcgcatctttaccaacatctaataagatcgcattcatggaaatg
tcacaaagattccatcttgataacttaccagctgtcatggagcaggcgttgaacggttgc
cgtgaaatacaagcgataatggaaaaagaagtacgaaagcatttgatgcaaatgggttct
gctggcgactggagtaatattgctaaataa
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