Bactrocera dorsalis (oriental fruit fly): 105232657
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Entry
105232657 CDS
T09719
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Pathway
bdr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105232657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdr03041
]
105232657
Enzymes [BR:
bdr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105232657
Spliceosome [BR:
bdr03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
105232657
Complex B
105232657
Complex C
U2 SnRNP specific factors
105232657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
DUF1699
Motif
Other DBs
NCBI-GeneID:
105232657
NCBI-ProteinID:
XP_011212733
UniProt:
A0A034VJC6
LinkDB
All DBs
Position
Unknown
AA seq
786 aa
AA seq
DB search
MSNYRGIGGGGFPYKVNQNRNVGASMNAVPPPSSLNNRGPQRGGGAARGAAGTTGATKYG
YTSLDSISQFTASQNLIGKRKAHTEDEYFDDDEEQTPEQAYIPAPGSPGYVNKNKADSDS
DEDPLDQFMAGIEQQVQKEKVRKEHAVVSPVEEIPGPKNAKGVRGDIDDEDDEESYYRYM
EENPNAGLRDDGSDIEIEYDEDGNPIAPPKKKDIDPLPPIYHSEIEYESFEKNFYTQHEE
ISNLSEDQVRELRKTLGVKVTGPEPPKPVSSFAHFGFDESLMKSIRRAEYTQPTPIQAQA
VPTALAGRDIIGIAKTGSGKTAAFVWPMLVHIMDQRELRTGDGPIGLILAPTRELSLQIY
NEAKKFGKVYNINVVCCYGGGSKWEQSKALEQGAEIVVATPGRMIDMVKMKATNLRRVTF
LVLDEADRMFHMGFEPQVRSICNHVRPDRQTLLFSATFKKRIERLARDVLTDPVRIVQGD
LNEANQDITQYVYVFPNPLQKWNWLLCHLVKFLSEGSVLVFVTKKADAETVANNLMVKEY
NCLLLHGDLDQADRNKVITQFKKKECDILVATDVAARGLDIPHIRNVINYDIARDIDTHT
HRIGRTGRAGEKGTAYTLVTDKDKEFAGHLVRNLEGADQQVPDDLMELAMKSSWFRSSRF
KQGKGKKIAIGGTGLGYRERSSGSSSIKSNSANESSSFASINKSISAAGPATDRYAAMRE
AYKAQYMSQFRASTDRTWEKTVPEAGVFAAPAPVLPSMQPTSSTSSGNAGAGDDSGKPRK
KKSRWN
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgagtaattaccgaggaattgggggtggaggctttccatataaagtgaatcagaaccgc
aatgttggggcatctatgaacgcagtgcctccaccttcttcgcttaataatcgtggacct
cagagagggggtggtgccgcgcgtggcgccgctggaaccactggagctactaagtacggt
tatacatcactggattcgataagtcagttcacagcttctcaaaatctcattggtaaacgc
aaagcacatacagaagatgaatattttgatgatgatgaggagcaaaccccggaacaagcc
tatattcctgcaccaggctcacccggctatgtgaataaaaacaaggcagatagtgattcc
gatgaagatccacttgatcagtttatggctggcattgaacagcaagtacagaaggaaaaa
gttcgaaaagaacatgcagtagtttctccagtcgaagaaattcccggaccaaagaatgcg
aagggcgtgcgcggagatatagatgacgaggacgacgaagaaagttattatcggtacatg
gaggaaaaccctaatgcaggccttcgtgatgatggttccgatatcgaaatagaatatgac
gaagatggcaatccaatagcgccacccaaaaagaaagacattgaccccttaccacctata
taccactcagaaattgaatatgagtcatttgaaaagaatttctacacgcaacatgaagaa
atttcaaatctgtcagaagatcaggttcgagagctgcggaaaacgttgggcgtcaaagta
actgggccagaaccaccaaaaccagtgtcctcatttgcgcattttggtttcgatgaaagc
ctaatgaagtcaatacgccgagcagaatatacccaaccgacgcccatacaagcgcaggca
gtgcctacagctctagctgggcgcgacattataggcattgcaaaaaccggttctggtaag
actgcagcttttgtttggccaatgcttgtgcacataatggatcaacgtgagctgcgcaca
ggtgatggtcccattggtctaattctagcacccacgcgtgaattatcgcttcaaatatac
aatgaagctaaaaaattcggaaaggtctacaatatcaatgtggtatgttgttatggaggt
ggctcaaaatgggagcaaagtaaagcacttgaacagggtgccgagattgttgtggctacg
cctggtcgaatgatcgatatggtaaaaatgaaagcgacaaatttgcgtagggtgacattt
ctagtgctagatgaggcagatcgcatgttccacatgggttttgagccgcaggttcggtcc
atctgcaatcacgtgcgtcctgatcgtcaaacattgctattttcggccacattcaaaaag
cgtatcgaacgtttggcacgcgatgtactcaccgatcccgtgcgcatcgtgcaaggcgac
ctcaatgaagccaaccaagacattacacagtacgtttatgtgttccccaatccactgcag
aagtggaactggctgctctgtcatttggttaagttcctatcggaaggcagtgtattggtg
tttgtcaccaaaaaagcggatgccgagactgtggccaacaacctaatggtgaaagaatac
aactgtttgcttctgcacggtgatctagatcaagctgatcgtaacaaagtcataacacaa
tttaagaaaaaagaatgcgacatactagttgccaccgatgtggctgcacgtggcttggat
ataccacatatacgcaacgttattaattacgatattgcacgcgacattgacacacatacg
caccgcattggtcgtacggggcgtgcgggtgaaaaaggtacagcctacaccttggttacc
gacaaagacaaagagttcgccggtcatctggtgcgcaatctagagggtgccgatcaacaa
gtacctgacgacttaatggaattggccatgaagagctcgtggttccgcagttcgcgcttt
aaacaaggcaagggcaagaaaattgccattggtggcaccggtttaggttatcgtgaacgc
agtagcggcagcagcagcataaaatcgaattcggcaaatgagtcctcctcattcgcatcc
ataaataagtcgatatcggctgcgggtccagccaccgatcgctacgcggccatgcgcgag
gcatacaaagcacaatatatgtcgcaatttcgggcttccactgatcgcacatgggaaaag
actgtgcccgaggcaggcgttttcgcagcaccggcgcctgtgttgccctcaatgcagcca
acgtcctcaacgtcgagtggcaatgcaggtgctggtgatgacagtggaaaaccacgcaag
aagaagagtcgttggaactaa
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