Bactrocera dorsalis (oriental fruit fly): 105232701
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Entry
105232701 CDS
T09719
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X13
KO
K06823
collagen type XVIII alpha
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bdr04147
]
105232701
00535 Proteoglycans [BR:
bdr00535
]
105232701
00536 Glycosaminoglycan binding proteins [BR:
bdr00536
]
105232701
Exosome [BR:
bdr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105232701
Proteoglycans [BR:
bdr00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
105232701
Glycosaminoglycan binding proteins [BR:
bdr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105232701
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
hEGF
Motif
Other DBs
NCBI-GeneID:
105232701
NCBI-ProteinID:
XP_029408803
UniProt:
A0A8N4QHW1
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All DBs
Position
5:2267458..2649546
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AA seq
1189 aa
AA seq
DB search
MASAAKRPNMQQNNNNKLGVHQGQAHDSIGVKMLALLVIFLCCGPLLAASSLDGLQGQSI
KDAFGEYSLTDMINAQSQGIEYEEADDGFPSYKFLPTSDVKTSYRVLLPERLYEFAILVK
FLPNSPKGGYLFSVVNSFESVVQLGLHLSTVSKNFWNVSLLYTQSDQISVSRKLVSYQLP
YRGKEWTTLSFQVLRDKVLFYYDCELNTTTTVVREPQDLVFDSASTLYLAQAGPRLTGHF
EGNLQQLYVYTNPDAVATVCKPPSKKLDDSYNEILDDESGSGFMEGASEDYDILDDSFWN
ATDDASGFPSQTPPPYPHERPYRTPKGEKGERGPKGPPGDSIRGPPGPPGPPGPKGESAT
FPPFVDFPTGADAKYTGKCTCNASDILEAIKDNEILRETIRGPPGLPGKEGKTGAPGLTG
ATGKPGERGAPGPKGDRGDRGDPGSRGPEGLQGHKGEPGVDGMPGMQGPPGPPGPPGLPE
NYDESLMGNSMRPMRSSSPGPKGPPGDKGDAGAAGERGQQGQKGERGDPGMTGEKGDRGH
PGVHGGNGQKGEPGQPGVPGMAGAPGAPGLKGDRGLPGELGPIGPPGPPGEVIYADNSLN
GTSSSAAGGQCQCPAGPPGPPGARGPQGYEGPPGLNGEPGPAGSNGLTGLPGSKGEKGEK
GVRGLSGPKGDRGPEGPPGQAFFAGGYEGMAMNGTKGEKGEKGMRGRRGKPGQAGPIGPP
GKPGPMGDIGHSGRPGLPGPKGDSGTKGQKGETGGREGPKGDKGDRGQDGRDGLPGPPGL
PAAAGEGVQYIPMPGPPGPPGAPGQPGMPGLSITGAKGEPGMDSRSFYGDASYYGRPASG
RSSLDEIKAMRELQDLRDRPDSTSGPPGPPGPPGPPSHSRHDDEETPYFSASSWNMRIVP
GAVTFSNIDEMTKKSAMNPPGTLAYITEEEALLVRVNKGWQYIALGTLVPIATPAPPTTV
APPVRVDIQSSNLLNNLPPLLNTPTWYPRMLRVAALNEPYVGDLQGIRGADFACYRQGRR
AGLLGTFKAFLSSRVQNLDSIVRVADRDLPVVNTRGDVLFNSWKGIFNGQGGFFSQAPRI
YSFSGKNVLTEPLWPQKHVWHGSLPNGERSIDTYCDAWHSSSIDKFGYASNLLGNKLLDQ
ERQTCDSKLIVLCVEALSQDRRRKRDLSDSEPEFHTAEAYARHLQEVLT
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggccagcgcagcaaagcgccccaacatgcaacaaaacaacaacaataagctcggtgtg
caccaaggacaagcgcacgacagtattggtgtcaaaatgttggccctgctagtgatattt
ctttgttgtggaccattgctggccgcttcgagtctcgacggtcttcaagggcagtctatt
aaagatgccttcggcgaatattcactaacggacatgatcaacgcacagtcgcagggcatc
gagtacgaggaggccgacgacggtttcccctcatacaaattcttacccacatccgatgtt
aagacatcatatcgcgtcctgctacccgaaagactttacgaattcgccatactagtcaaa
tttctgccgaacagcccgaagggtggttatctctttagcgtggtaaactccttcgagtct
gtggtgcagttgggtctgcacttgtcgacggtcagcaagaatttctggaatgtttcattg
ctctacacgcagtctgatcagatttcggttagccgtaaattggtcagctaccaattgcca
tacaggggcaaggagtggacaacactttcatttcaggtactcagggacaaggtgctcttc
tactacgattgcgaactaaatacgacgacaacggtcgtgcgggaaccacaggacttggtc
ttcgattcagcctcaactttgtacttagcgcaagcaggccccagattaactgggcatttt
gagggaaatttacaacaattgtatgtttatacaaatccagatgctgtggcaactgtgtgt
aaaccgccatcaaagaagctggatgacagctataatgaaattttagatgacgaaagcggc
tcgggctttatggaaggtgcgagcgaagactatgacattttagatgattccttctggaat
gcgacggacgatgccagtggatttccatcacagacgccacctccttatccgcacgaaaga
ccctatcgcacacctaaaggtgaaaaaggtgaacgtggccctaaaggaccacccggtgat
agcatacgtggtccaccgggaccaccggggccgccgggccctaaaggtgaatcggcaact
tttccgcccttcgttgattttcccaccggtgccgatgcgaaatacactggcaaatgcacg
tgcaacgcgtctgatatcctagaagcaatcaaagataatgaaatattacgtgaaacaata
cgcggcccacccggactgccgggcaaggagggaaagactggtgcgcctggactcacgggt
gctacagggaagccaggtgaacgcggtgcccccggtccgaaaggagaccgcggcgatagg
ggcgatcctggctcccgtggacccgagggtctgcaaggccataaaggtgagcctggcgtc
gacggcatgcccggcatgcaagggccacccggcccgcccggaccgcctggcttgcctgaa
aactacgatgaatccttaatgggcaattcaatgcgtccgatgcgcagctcttcgccggga
cccaagggcccgccaggtgataaaggtgatgccggtgcggcgggcgaacggggtcagcag
ggtcagaaaggtgaacgtggcgatccgggaatgactggcgagaaaggtgataggggtcat
ccgggcgtacatggcggtaatggccaaaaaggcgaaccaggccaacccggtgtgccgggc
atggctggagcgcccggtgcgcctggtctcaaaggtgatcgtggtctgcccggtgaattg
ggtcccatcggaccacccggtccacctggtgaagttatttatgcagacaattcgttgaat
ggtacatcgagcagcgcggcgggcggacaatgtcagtgtccagcgggtccacctggaccg
ccgggtgcacgcggtccgcagggctatgaggggccacccggtttgaacggcgagcctggt
ccagctgggtcgaacggtttgaccggcctgcctggctccaaaggtgagaagggcgaaaaa
ggtgtgcggggcctgagcggcccgaaaggcgatcgcggacccgaaggaccgccagggcag
gcctttttcgctggcggttacgaaggcatggctatgaacggcaccaagggggagaaggga
gagaagggtatgcgcggacgacgcggcaaaccgggccaagctggaccgatcggaccgccg
ggcaaacctggtccaatgggcgatattggacattcgggtcgacctggactacccggcccc
aaaggtgattcaggtaccaaaggacagaagggtgaaactggcggacgagaaggacccaaa
ggcgacaaaggcgatcgcggtcaggatggacgagacggcctgcctggaccacctggcctg
ccagcagcggccggcgagggtgtgcaatacataccgatgcctggcccaccaggaccgcca
ggcgcgcccggtcaacccggcatgcccggtttatcaataaccggtgcgaaaggtgagccc
ggcatggattcgcgcagtttctacggtgatgcgtcttactatggacgaccggccagtgga
cgctcctctctcgatgaaatcaaagctatgcgtgaactacaagacttgagagatcgtcca
gacagcacatctggcccgcccggtcctcccggcccaccaggtccacccagccattcgcgt
catgacgatgaagaaacaccatacttctcagcatcttcctggaatatgcgcatcgtaccc
ggtgcggtgacgttttcgaatattgatgaaatgacaaagaaatcagccatgaatccgcca
ggcacactggcctacatcacggaggaggaagcgctgctggtgcgcgtcaacaagggttgg
caatatattgcgcttggcactttggtgcccattgccacacccgccccaccgactacagta
gcaccgccagtgcgcgtcgatatacaatcatcgaatctgctcaataatctgccgccgcta
ttaaatacgccaacgtggtatccacgcatgcttcgcgtagcggcactcaacgagccttac
gtcggcgatctgcagggcatacggggcgctgacttcgcctgctatcggcaggggcgccgc
gccggcttattgggcaccttcaaagccttcctgtcatccagagtgcaaaatcttgactcg
attgtacgtgtcgcagaccgcgatcttccggtagtgaataccagaggggacgtcctcttc
aactcgtggaagggcatcttcaacggccaaggtggcttcttctcgcaagcgccgcgcata
tacagttttagcggcaaaaatgttctaacggagccgttgtggccacaaaagcacgtttgg
cacggttcactacccaacggtgagcgttcgattgacacatattgcgacgcttggcactcg
agttccatagataaattcggttatgcaagcaatttgctggggaacaaactgctcgaccag
gagcgacaaacttgcgatagcaaattaattgtgctctgcgtggaggcgttgtcgcaggac
agaaggcgaaagcgcgatctcagcgacagcgaacccgagttccacacggcggaggcatac
gcgcgtcacctgcaagaggtgctaacttga
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integrated database retrieval system
