Bactrocera dorsalis (oriental fruit fly): 105232896
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Entry
105232896 CDS
T09719
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Pathway
bdr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105232896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdr03041
]
105232896
Spliceosome [BR:
bdr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
105232896
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
PRP4
ANAPC4_WD40
NBCH_WD40
Beta-prop_EML
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WD40_like
Beta-prop_SPT8
WD_LRWD1
DUF6597
PurA
Nha1_C
Motif
Other DBs
NCBI-GeneID:
105232896
NCBI-ProteinID:
XP_011213089
UniProt:
A0A034VMW8
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Position
5:complement(18430351..18432580)
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AA seq
540 aa
AA seq
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MSDDEDIQYVKRQRTLHYGSLEEVERKRQTAAVAGACSTATASTSSGVAVTNQLEDIESD
EDYEEVKKPTAPTLPPTSGALANKIDDDYFDLETEVAKDKEALLKEFERKKRARQINVST
DDAEIKANLRQLNEPICYFGEGPAERRRRLKELLASLGENAIKQKQTEEEERKQLQKEQE
TTWYHEGPEALRVARIWIADYSLPRAKTRLEHARSLLDVPSATRAGRLVELQKRLHALAP
QCSQVGDTRPVSGVAFSEDSKLIMTSSWSGLCKVWTVPDCKLLLTLRGHASYVGGVAFRP
GVTQDDKNVVAMASGGHDGAVKLWGFNSEESLADITGHMPHRVSKLGFHPSGRFLATACY
DSSWRLWDLEQKTEVLHQEGHAKAVHSLSFQIDGSVIVTGGLDAFGRVWDLRTGRCVMFL
EGHLGSIFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQRDGGS
FLVTSSYDCTTKIWSNKTWQPLKTLLGHDGKIMAVDISPDSQHIVTASFDRTFKVWASES
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgatgaggacatccagtatgttaaaaggcagcgcacactgcactacggttct
ctggaagaagtagagagaaagcgccagacagctgctgtagcaggggcatgctccactgcc
actgcatccacttcaagtggtgttgcggttaccaatcaactcgaagatatcgaatctgac
gaagattatgaggaggtgaaaaaaccaacggcgccaacattacccccgacttctggtgct
ttagctaataagatcgatgacgactattttgacttggaaacagaagtagcgaaagacaaa
gaagcgctgctaaaagaatttgaacgcaaaaaacgtgcacgtcaaataaacgtttccacc
gatgatgcagaaataaaagctaatttgcgacagttaaatgaaccgatatgctactttggg
gagggtccagcagaaagacggcgccgtttaaaagagttattagctagcttaggggaaaat
gcgattaagcaaaagcaaaccgaagaggaagagcgaaaacaacttcagaaagaacaagaa
acaacatggtaccacgaaggaccggaagctttgcgcgtggcaagaatatggattgcagat
tactccttaccaagagcaaaaacacgtctagaacatgcgcgatctctactagatgtacca
agcgcaacacgcgctggccgattagtagagcttcaaaagcgcttacatgccttagcaccg
caatgcagtcaagtgggagatacgcgtccagtaagtggagtagcgtttagcgaagactct
aaattgattatgacatcgtcatggtccggtttgtgcaaagtgtggacagtaccagattgt
aagctactgttaacactgcgaggtcatgcaagttatgttggtggtgtagcattccgacca
ggcgtgacgcaagatgataaaaatgttgtagcaatggcttctggtggtcatgatggagca
gtgaagttgtggggctttaattcggaagaatctttagctgatataactgggcatatgcca
catagagtttccaaattagggtttcatccatctggtcgttttctagcaacagcctgttat
gactcctcttggcgcctatgggacttggaacaaaaaactgaagtcctgcatcaagagggg
catgccaaagcagttcatagccttagctttcaaatcgatggcagtgtcatcgtgactggt
ggacttgacgcatttggacgtgtatgggatctaagaacaggccgttgcgtaatgtttcta
gaaggtcatctgggctctatttttggcgttgatttctcaccaaatggatttcatattgct
actggttcacaggacaatacttgcaaaatttgggacttacgtcgtcgacagccagtttat
acgattcctgcacatacaaacctaatttcagatgtaaaataccagcgagatggtggcagt
tttctggttacatcctcttatgattgcactacaaaaatttggtccaataaaacttggcag
ccattaaaaacattattgggacatgacggcaaaataatggctgtggacatctcacccgac
tcgcaacatattgtaacggcgtctttcgatcgtaccttcaaagtgtgggcatcggagagc
tga
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