Bactrocera dorsalis (oriental fruit fly): 105232919
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Entry
105232919 CDS
T09719
Name
(RefSeq) RNA-splicing ligase RtcB homolog
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bdr03016
]
105232919
Enzymes [BR:
bdr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
105232919
Transfer RNA biogenesis [BR:
bdr03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
105232919
Prokaryotic type
tRNA splicing ligases
105232919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-GeneID:
105232919
NCBI-ProteinID:
XP_011213123
UniProt:
A0A034W5W1
LinkDB
All DBs
Position
1:41572695..41575091
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AA seq
506 aa
AA seq
DB search
MVVRPYNEELKYLEKISDCCWRIKKEFQPNMKVEGCFYVNSRLERLMLEELKNSCRPGAV
GGFLPGVKQIANVAALPGIVGRSIGLPDIHSGYGFAIGNMAAFDMLDPTSIVSPGGVGFD
INCGVRLLRTNLFEKDVQPVKEQLAQSLFDHIPVGVGSKGIIPMNAHDMEEALEMGMDWS
LREGYVWAEDKEHCEEYGRMLNADPSKVSLRAKKRGLPQLGTLGAGNHYAEIQIVDEIYD
KWSASKMGIEEKGQVCVMIHSGSRGFGHQVATDALVQMEKAMKRDQIETNDRQLACARIN
SQEGQDYLKAMAAAANFAWVNRSSMTFLTRQAFAKMFNTTPDDLDMHVIYDVSHNIAKVE
NHIVNGKEKQLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLVGGTMGTCSYVLTGTEKGM
HETFGSTCHGAGRALSRAKSRRNLDYKDVLEKLDEMGIAIRVASPKLVMEEAPESYKDVT
DVVDTCHMAGISKKCIKLRPIAVIKG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggttgtgagaccttataacgaagaattgaaatatctcgagaagataagcgattgctgc
tggaggattaaaaaagaatttcaacccaatatgaaagtggaggggtgtttctatgtaaac
agccggttagaacgactcatgttagaagagcttaaaaactcatgtaggccgggagcagtt
ggtggtttcttgccaggagtaaagcaaatagctaatgtggctgctttgccaggcattgtt
ggacgatctattgggctcccggatattcattctggttatggatttgctattggaaatatg
gccgcatttgatatgcttgatcccacatcaattgtaagcccaggaggagttggttttgat
atcaattgcggtgtacgtttactgcgtacaaatctctttgaaaaagatgttcaacctgtt
aaagaacaattggcgcaatccctatttgaccatattccagttggagttggttctaaaggt
atcatccctatgaatgcccatgacatggaagaggctcttgaaatgggcatggattggtct
cttcgtgaaggatatgtgtgggctgaagacaaagagcactgtgaagaatatggtcgtatg
ttaaacgcggatccctcaaaagtaagtttgcgtgcaaaaaagcgaggtcttccgcaattg
ggaacattgggagcaggcaatcattatgctgaaattcaaattgttgatgaaatttatgat
aaatggagcgctagtaaaatgggaattgaagaaaaaggtcaagtatgtgtcatgatacat
tctggcagtcgaggatttggacatcaagttgctactgacgctttggttcaaatggagaaa
gccatgaaacgagatcaaattgaaacaaatgacaggcaattagcatgtgctcgcataaac
tcacaagaaggccaggattatttaaaagccatggcagctgccgcaaattttgcttgggtt
aatcgaagctcgatgacttttctcacgcgccaagctttcgccaaaatgttcaacacaact
cccgatgatcttgatatgcacgtgatttatgatgtgtctcataatattgcgaaagtagaa
aatcacatcgtcaatggcaaggaaaaacaattgctggtgcatagaaagggatcaacacgg
gcttttccaccacatcatcctcttataccagtggactatcaattaactggccaacctgtt
ttggtaggcggtacaatgggcacatgcagttacgtgctaactggaaccgaaaaggggatg
catgaaacttttggctctacatgtcatggagcggggcgcgctttatcacgtgctaagtca
cgacggaacttagattacaaggacgttcttgaaaaattggacgaaatgggtattgctata
cgtgtggcatcacctaagcttgtaatggaggaggcaccagaatcttacaaagatgttact
gatgtcgttgatacttgtcacatggcaggaattagcaaaaaatgtataaaattgcgtcca
attgcagtaattaaagggtga
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