Bactrocera dorsalis (oriental fruit fly): 105233330
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Entry
105233330 CDS
T09719
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdr03019
]
105233330
Enzymes [BR:
bdr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105233330
Messenger RNA biogenesis [BR:
bdr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
105233330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
OB_NTP_bind
DEAD
zf-C2H2_DHX34
HA2_C
ResIII
nSTAND3
HA2_N
AAA_22
AAA_19
Rad17
ATPase
Herpes_ori_bp
Motif
Other DBs
NCBI-GeneID:
105233330
NCBI-ProteinID:
XP_049312514
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All DBs
Position
4:complement(67245912..67252122)
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AA seq
1150 aa
AA seq
DB search
MSKSSKHSKKSGSFEEETNLINFSFCDHKSVFRHLLEGNDKYSAPIVEDETDFWKFVNKY
ESMLRSAGQPILGKPLSDAELSNPASYHKLKYIPLQLERGSDSEQLRRGCHNNDERIFTK
LKARQFREIVLIYLDFKQKERFSKIKKLRLAQRSLPIANFKQKIQDELKETRVLIIAGDT
GCGKSTQVPQYLYEFGYRSIACTQPRRLACVSLSKRVAHEMLDDYGSKVGFQIRFEKNKT
KNTNIVFITEGLLLRQLAVEANLEQYDVLILDEIHERNLFGDFLLGVTKCLLHAKPDLKL
ILMSATINVELFHNYFKNEGAALIVVPGRLYPIKTIFMPPPSLELKGGAGGSKGAKSTNR
LDPAPYIQVLSLIDQKYPTTERGDVLIFVSGVNEITTVCDAAKEYAEQNSHWIILPLHSG
LALAEQDKVFDYAPENMRKCIVSTNIAETSLTVDGVRFVIDSGKVKEMSYDSSCKGQRLK
EFWVSKSSAEQRKGRAGRTGPGTCFRLFSEKQYGTFEAYSTPEIFRVPLETILLQMTSMG
LPNVRSFPFIESPEEECIEQAIWSLKQHNALAVDEKITPLGKSLSNLPVEITIGKMLLMG
CVFPDVEKILTLAAIMSVQNPFTNRAYTDRKCEQEREPLQSDQGDVFTLLCAYHEWLQLK
WHNENTRKWCHKLGIEEQRFYEITKLRNQFQNILESCNMTCKNADGAPLSSAERARRHGE
VRQLKAIKRKQKYQEPRKRKVLKHSGYGAGDDEYDDAAAGDDIRDVDFRLQHDAGKLEVL
LNSAKGDKLRDVLLLKLIIVSGFYPQIAIADEFNYCKSGSQQFFHTFLKPFISIHPNAYF
AKYFDVLKLNDSDILDKPSYYTPKQLLSTRHQVLCYQNLLETAKPYLMNCIRMPAAQTLL
LFSYSVDTNASVTRIVCDSWLCLEFPVPETGCELLCRAIKLRRLWAKLLSQKLTDLVNNV
ESQSAKKSKHAKDEESELWESLIDFISANVSYTIKRLLPADLKSLYTQQKLSNFEAFEVN
PFAADYAVSHNEEKGGINVLENVVYGCLQEVQWTLAMEAEMRQHTWICKTCDTEMALDTI
EKLLHKTTCRATSSSTTIKRETVSPTLPSSSGSSKGSAYFCEFCHKELGNMSKIDILKHK
KYCNKSDAPK
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaatcgtccaaacattctaaaaaatcgggctcttttgaagaggaaacgaattta
attaatttttcattttgcgaccacaagtctgtcttccggcatttgctggaaggcaatgat
aaatactccgcaccaattgtagaggatgaaactgatttttggaaatttgtgaataaatat
gaaagtatgttacgcagtgcgggtcaaccaatactcgggaaacccttatcagacgctgaa
ttaagtaatccagcatcatatcacaagctcaaatatataccattgcaattggaacgcggc
agtgactccgaacaactaagacgtgggtgtcacaataatgatgaacgaatattcacaaaa
ctgaaagcacgacagttccgagaaattgtgctcatctatctggattttaagcagaaggaa
agattttcgaaaattaagaaattacgcctagcacaaagatccctacccatcgcaaatttc
aagcaaaaaatacaagacgagctcaaagaaacacgagtactgattatagctggcgacacc
ggttgcggaaagtccacacaagtgccacagtatttatatgaatttggttatcgtagcata
gcgtgcacgcaaccgcgccgcttagcttgtgtttcactgtccaaacgggttgcgcatgag
atgcttgacgattatggctccaaagtgggttttcaaatcagatttgaaaaaaataaaaca
aaaaatacgaatatagtcttcatcactgaaggtttactgttaagacaattggcagtggaa
gccaatttagagcagtacgatgtgctcattttggatgaaattcacgaacgtaatctcttt
ggcgacttcttgttgggtgtcaccaaatgcctgctacatgccaagccagatttgaagctg
atacttatgtcagccaccataaatgtagaattgtttcataattactttaagaatgagggc
gcagcactcattgtggtgccgggcagattatatccgattaaaactatttttatgccacca
ccaagtttggaactgaaagggggagcaggcggcagcaaaggtgcgaaaagcacgaatcgt
ttagatccagcaccttacatacaggtgttaagtttgattgatcaaaaatacccaacaact
gaacgcggtgatgtcctaatatttgttagtggcgtaaacgaaatcacaacggtttgcgat
gccgccaaggaatatgctgagcaaaactcacattggatcatattaccgctgcacagtggc
ttggcgctcgcagagcaagacaaagtattcgactacgcaccggaaaacatgcgcaaatgt
atagtgtccacaaatattgcagaaacttcactcaccgtcgatggcgtgcgtttcgtcatc
gattctggtaaagtgaaggaaatgagttacgattcgagttgtaaaggtcaacgcttgaag
gagttttgggtatcaaaatcctcagccgagcaacgtaaaggtcgcgctggacgcacagga
cccggcacttgctttcgtctcttctcggagaaacagtacggtactttcgaggcatattcc
acgccagaaatattccgtgtgcctttagaaacgatactcttgcaaatgacctcaatgggt
ttgcccaatgtgcgttcgttcccgtttattgaatcgcctgaagaagagtgcatcgagcaa
gcgatttggtcgctcaagcagcataatgcgctcgctgtggatgaaaagatcacaccactt
ggcaagtcgctgtccaatttaccggttgagattacaatcggcaaaatgttgcttatgggt
tgtgtgtttcccgatgttgagaagattttaacgctggctgcaatcatgagcgtgcagaat
ccgtttacaaatcgcgcctatacggatcgcaagtgtgagcaagaacgtgagcctcttcag
tccgatcaaggtgatgtgtttaccttgctgtgcgcttatcacgagtggctgcaattgaaa
tggcataatgagaacaccagaaaatggtgtcataaactggggattgaggaacagcggttt
tatgagatcaccaaattgcgcaatcaattccaaaatatactcgaaagttgtaacatgacc
tgtaaaaatgcggatggcgcaccactgagcagcgctgagcgtgcgcgccgtcatggtgaa
gtgcgtcagctgaaggcgatcaagcgtaaacagaaataccaagagccgcgcaaacgtaaa
gtcctcaaacacagcggttacggtgccggcgatgatgagtacgacgacgctgccgcaggc
gatgacatacgcgacgtggactttcgcttacagcacgatgccggcaaactggaggtgctc
ttaaactccgccaaaggcgacaaactgcgcgatgtcttgctgctcaagttaatcatagtc
agcggcttctatccgcaaattgcgatcgctgacgagttcaactactgcaaaagtggcagt
caacagttcttccacacatttctaaagcccttcatatccatacatccgaacgcgtatttt
gccaaatatttcgatgtgctcaaactgaacgatagcgacatactggacaagccgagctac
tacacgccgaaacagctgctaagcacgcgacatcaggtgttgtgctatcaaaatttgctg
gagactgcaaaaccctatttgatgaattgcatacgcatgccggccgcgcagacgctactg
ctgttctcctattcggtggacaccaacgcatccgtcacacgcatagtgtgcgattcgtgg
ctgtgcctggagttccccgtgccggagacgggctgtgagctgctgtgccgcgccatcaaa
ctgcgccgtttgtgggccaaactgttgtcacaaaaactgaccgatttagtcaacaatgtg
gagagccaaagcgcaaagaagtcgaaacacgccaaagacgaagagtctgaactctgggag
tcactcatcgacttcataagcgcaaatgtgagttatacgataaaacgcttgctgcccgcc
gatttgaaatcgctttacacgcagcaaaaacttagcaatttcgaagctttcgaagtcaat
ccgtttgctgccgactatgcggtgagccataacgaagagaaaggtggcataaacgtgctg
gaaaatgtggtctatggttgtctacaagaagtgcaatggacgctggcaatggaggcggaa
atgcgtcaacacacgtggatttgcaagacatgcgacactgagatggcgttggacaccata
gagaaattgttgcacaaaacaacttgccgcgccaccagctcgtctacaacaatcaaacgc
gaaaccgtttcaccaacgctgcctagttcatcggggtcgagcaagggtagcgcttacttc
tgtgagttctgccacaaggaattaggaaatatgagtaaaattgatattttgaagcacaaa
aaatattgcaataaatctgatgcgccgaaataa
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