Bactrocera dorsalis (oriental fruit fly): 105233645
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Entry
105233645 CDS
T09719
Name
(RefSeq) collagen alpha-2(XI) chain
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Pathway
bdr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105233645
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bdr00536
]
105233645
Glycosaminoglycan binding proteins [BR:
bdr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105233645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
105233645
NCBI-ProteinID:
XP_049312962
UniProt:
A0ABM3JUP3
LinkDB
All DBs
Position
1:complement(7571470..7585586)
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AA seq
1889 aa
AA seq
DB search
MRFPWNVMLRNHHLTGLTKIGFYIVFAVTLLATNFTTARAAEPSDDGFVNLIREFGLPEL
PPGIIGVPGMCGVERNPYQVYNSPAFRISKDAMLTIQTAQAFPNGFPTDFSIILALRSNQ
TNPTKAPIFTIYSDESEEVLSLSLGKEISLSYEQSDATFSQRNTINFGIGISDTNWHRIG
VSVKGTAATLVVDCTKQVTRRVERSRGSTISTNGLILTGAQMTNDQGFFAGDVQLMAIVN
SPEAGYEVCTRYATPCVQQGVVTLERYTSVGGGDGGGGGGATWSWSSSSSSSSNGRAGDG
VGDGAGLGGATLGLFEGRRQLDGRAINGAVGGVLASGPNFQYSNSRSYSSGPLVDSGDLI
GNLQVNGGGRRQEQGANGISGNAVGVGEGGQESAALPNFPAEFDSDDYAIDPNLDLNFDN
YVDFTTPSNQETNDNEEARKGLESDGNESNVNSTEPHIPAVNRNVDGRRNGGPKQNSSDP
SYVVGGSNTICYPGPRGYTGTPGPPGEPGPKGEAGRDGLAGTQGIQGPPGHVFVVPTTQG
GNEKGPDTQAEALRQMISQHMMALRGPEGPMGLTGVPGPPGMPGQRGDKGEPGDVGEPGL
RGLRGPSGPPGRDGRRGRSGRDGERGAVGPQGPKGEIGPMGPIGLPGEKGHRGLPGLTGE
KGQQGVEGHPGEEGPPGLPGLPGELGPRGFPGPRGFPGPAGNPGLQGAEGQQGAKGATGL
TGPAGPPGQIGPNGPPGAPGPQGNLGPPGIAGPPGKPGLPGLPGADGAPGHAGTPGAIGP
KGDQGMQGVQGPVGFPGPRGLKGDDGQRGSPGDKGDNGDRGLDGEKGDAGLPGERGSPGS
PGSPGPEGPEGPKGFEGPRGETGSQGLPGEKGKQGPQGFQGYPGPSGDKGDKGATGTSGP
AGIKGERGLQGQSGERGEMGPRGFRGSRGRRGNDGNPGPKGDTGQPGAPGPQGESGPQGT
EGPRGFIGLPGAPGADGKNGVMGPPGERGQPGEAGKPGPPGEPGVIGPRGAPGELGPIGE
SGAPGLPGLPGEAGLPGESGKEGPPGPIGPIGIPGPQGATGLPGFPGERGHQGQPGLPGL
KGEQGLLGAPGYPGDKGQSGEPGNSGPQGAPGNPGPPGSAGSPGAKGEPGEKGPIGPAGR
DGLTGLRGLPGPPGPQGTPGEDGDKGETGPPGEKGLKGSRGEPGPVGSTGAQGPRGESGP
PGSPGDKGPPGETGRRGIKGEDGKPGLPGPVGKPGVQGLPGPAGLKGERGDDGLIGPVGP
PGLPGEQGRRGLKGVHGQQGKPGPRGPQGATGSDGPQGPPGPVGPMGKIGEPGSPGPKGE
QGKSGPIGPPGRKGIQGQEGPKGAVGPRGYPGARGEPGLMGPKGDVGPDGEDGKPGEQGP
IGDMGPEGRIGEPGPTGKQGPEGPAGLQGSPGPIGEKGDKGDLGPQGPQGILGPQGLPGL
QGQPGTRGLPGEVGETGLPGPEGVPGKEGSIGEQGPAGPKGDRGRRGPKGHRGELGMVGL
KGDQGDKGDRGLRGPHGPEGRKGEPGPVGALGPKGNDGPQGQPGPIGPPGPKGTEGAAGD
KGDTGPPGPAGPPGAPAEAPLIPPELLFQMQQYSGTKAETRRRRDIDIHEDLVPFEEDDD
FNEIMGVPSAPEPTSATQDHHKKSKRKRKKKPTLHGEAAAGGKLVDMYSAIYSMRLEMDR
MRKPTGTQDNPVRTCRDLHYAHPQFENGWYWVDPNAGMPDDAIYVYCNMSAGGETCIQPD
AHTAEAPLVPRRQPGQLDWYSRLSGGEKITYDGVGSVQLTFLRLLTEEAHQNFTYICSNS
VAWYSAAEQGYAQSLRLLGENDMEIAHEGTDLKPEVLRDECQQPNAHGETVLLVRTKRLN
YLPLVDFYPRDFARTDQAFGFKVGPACFK
NT seq
5670 nt
NT seq
+upstream
nt +downstream
nt
atgagattcccatggaatgttatgttgcgaaatcatcatttaactggactcacgaaaatt
ggcttctacattgtttttgctgtgactctactggctactaattttacaactgcaagggca
gcggaaccaagtgatgatggctttgtgaatttaatacgcgagttcggcttacccgaactg
ccgcctggtatcattggtgtaccgggcatgtgcggcgtggaacgtaatccttatcaagta
tacaactcgccagcttttcgcatctccaaagatgctatgcttaccatacaaaccgcacaa
gccttccccaatggttttcccacggacttttcaattattttagctttgcgcagcaatcaa
acgaatccaacgaaggcgcccatttttaccatctattcggacgagagtgaggaggtactt
tcgcttagtcttggcaaggagattagtcttagctatgagcaatcagatgcgactttcagc
caacgtaacaccattaatttcgggattggtataagtgatacgaattggcatcgcattggt
gtgagtgtgaaaggcacggctgcaactttggtggtggattgtaccaaacaggtgacgcgt
agagtggagcgttctcgtggcagcaccatttcgacaaatggcctaatacttactggcgca
caaatgacaaatgatcagggatttttcgccggtgatgtgcaattgatggccattgtaaat
agtccggaagcgggttatgaagtttgtacacgttatgccacaccttgtgtgcaacaaggc
gttgttactttagagcgatatacaagcgttggtggcggtgatggtggtggtggtggaggt
gccacttggtcgtggtcatcatcatcgagcagcagcagcaatgggcgagcaggtgatgga
gtcggcgatggcgccggtttgggtggagccacgctcggtcttttcgaaggtaggaggcaa
ctcgatggcagagcaataaatggagctgttggtggggtccttgcaagtggtcctaacttt
caatacagcaattcacgtagttatagctcgggacctctggtagatagcggcgatttaatt
ggaaacctccaagtgaacggtggtggacgaagacaggaacaaggcgctaatggtattagc
ggaaatgctgttggtgttggtgaaggtggccaagaaagtgctgctctaccgaatttccca
gcagaatttgattcagatgattatgccatcgacccaaatttggatctgaactttgacaat
tatgttgattttaccacaccctctaaccaagaaactaatgacaacgaagaagccagaaaa
ggtttggaatctgatggcaatgaatccaacgtaaattctacagagcctcacatccccgcg
gtaaatcgaaatgtagatggacgaagaaatggtggccccaaacagaattcgtcagatcca
agctatgttgtgggtggtagtaacaccatctgttatcccggtcccagaggttatactggc
acgcctggaccaccgggcgaaccaggaccaaaaggtgaagctggtcgagatggtttggcg
ggcactcaaggcatacaaggaccaccaggacatgtgtttgtagttcctacgacacaaggt
ggcaatgagaagggaccggatacacaagcggaggctctgcgacaaatgatatctcaacat
atgatggctttgcgtggacctgaaggaccgatgggactcacaggagtacctggtccacca
ggtatgcctggtcaacgtggtgataagggcgaacccggtgatgttggggaaccggggtta
cgaggattgcgaggacctagtggcccaccgggacgtgatggacgacgtggtcgttctgga
agagatggtgaacgaggagcagttggacctcagggaccgaaaggtgaaatcggtccaatg
ggtcctattggtttgccgggtgaaaagggtcatcgtggtttaccaggcctaacgggtgag
aaaggccagcaaggtgtagaaggacatcctggcgaagaaggaccacctggcctacctggt
ttacctggagaactgggcccacgcggtttcccaggaccacgtggtttcccaggacctgca
ggcaatccagggttacaaggagcagaaggccaacagggagccaaaggtgctactggttta
acaggaccagcagggcctccagggcaaataggtccaaatggtcctcctggagcacctggg
cctcaaggaaatcttggaccgcccggtattgctggaccacctggtaagcctggacttcca
ggtttgcctggggcagatggtgctcctggtcatgcgggcacaccaggcgccattgggcca
aaaggcgaccaaggaatgcaaggcgtacaaggtcctgtcggatttcccgggcctcgcgga
cttaaaggcgacgatggacaacgtggttctcctggcgataaaggtgataacggcgacaga
ggattagacggtgaaaagggtgatgctggtttgcctggtgaacgtggctcaccaggttca
cctggtagcccaggcccagaaggtccagagggtccaaaaggttttgagggtccaagaggc
gaaactggttcacaaggtttacccggtgaaaagggtaaacaaggtccacaaggctttcaa
ggttatcctggtccgtctggtgataagggagacaaaggtgcaactggaacttccggaccg
gcgggtataaaaggcgaacgtggtttgcaaggacagtcgggtgaacgtggtgaaatgggc
cctagaggctttagaggctcgaggggaagacgtggtaacgatggtaatcccgggccgaaa
ggggacaccggtcaacctggagcaccaggccctcaaggtgaaagtgggccacaaggaaca
gaaggtccgcgtggtttcattggattaccaggtgcacctggcgcagatgggaagaacggt
gttatgggtccaccaggagaacgagggcagcctggcgaagcgggaaaacctggacctcca
ggagaaccaggagttattggaccacgtggagcacctggcgaactaggccctattggagag
tctggagcaccaggtttgccagggttaccaggagaagcaggcttaccgggtgaatcaggc
aaagaaggcccacctggtccgattggtcctataggaatccctggaccgcagggtgcaaca
ggtcttccgggttttccaggtgaacgtggtcatcaaggtcagcctggattacctggtctg
aaaggggagcaaggtttactaggtgcccctgggtatcctggtgataaaggtcagtcgggg
gagcctggaaattccggtccccagggtgctccaggaaatcctggtcctccaggcagtgcg
ggttcacctggtgctaaaggtgaacctggtgaaaaaggaccaattgggccagctggtaga
gacggtttgactggactacgtggcttaccagggccgccgggtcctcaaggtacgcccggt
gaagatggtgacaaaggagaaactggaccacctggtgaaaaaggtctgaaaggaagtagg
ggcgaaccaggtccagtaggatccactggagcacaagggccacgtggtgaatctggacca
cctggctcgccgggggacaagggaccgccaggagagactggtcgaaggggtattaaaggt
gaagatggaaaacccggcctaccaggacctgttggtaaaccaggtgttcaaggtctacca
gggccagcaggccttaaaggtgagcgcggtgatgatggactaattggtccagtaggacca
ccaggtttgccaggagaacaaggcagaagaggattgaaaggagtacatggacaacaggga
aaacctggaccccgcggtcctcaaggtgcaacgggttcagatggaccacaagggcctccg
ggtcctgtgggtccaatgggtaaaataggggaacctgggtcaccaggccctaaaggagag
caaggtaaatctgggccaatcggtccacctggacgaaaaggcatacaaggtcaagagggg
ccaaaaggtgctgttggcccacgtggttatccaggcgcgagaggtgagcccggtttgatg
ggaccaaaaggtgatgtgggacctgacggtgaagatggaaaaccaggcgagcagggacca
atcggcgatatgggaccagaaggcagaataggtgaacctggcccaacaggaaaacaaggt
cctgaaggaccagctggcttacaaggaagcccaggaccaattggtgaaaaaggtgataag
ggcgatttggggccgcaaggaccgcaaggtattttaggcccacagggattgcccggacta
cagggacagcctggtacaagaggattgccgggtgaagtaggtgaaacaggattgcccgga
ccagagggtgtacccggaaaagaaggcagtattggagaacaaggaccagcaggacccaaa
ggtgatcgtggtagacgtgggccaaaaggccatcgtggcgaattaggaatggtgggattg
aaaggtgatcaaggtgataaaggtgatcgcggcttacgtggcccacatggaccagaggga
cgcaagggcgaaccaggccctgtaggagcactcggacctaaaggcaatgatggtccacaa
ggccaacctggaccaattggtccacccggacctaaaggaactgaaggagcagctggcgat
aaaggtgacacaggtccacccggaccagctggaccaccaggtgcgccagccgaagctcca
ctcataccaccagaactgctcttccaaatgcaacaatactcgggcacaaaagcggaaaca
cgtcgacgacgcgatatagacatacacgaggatttagtgccatttgaagaagatgatgac
ttcaatgaaattatgggtgtgccttcagcgccagaacctacaagcgctacacaagaccat
cacaagaaatcaaaacgaaaacgtaagaagaagccaacactacacggcgaagcggcagcg
ggcggtaaactggtggacatgtacagcgccatctacagcatgcgtttagaaatggaccgc
atgcgcaaaccgaccggcacgcaggacaaccccgtgcgcacctgccgtgacctacactat
gcgcatccacaattcgagaatggctggtactgggtcgatccgaacgccggcatgcccgat
gatgcgatctatgtctactgcaacatgagcgccggcggcgagacctgcatacaaccagat
gcgcatacagcagaagcgccattggtaccgcgtcgtcaacccggccaactcgattggtat
tcacgcctaagtggtggcgaaaaaatcacctacgacggcgtgggctctgtgcagctgacc
ttcttgcgcctgctaactgaggaggcgcatcagaatttcacctacatctgcagcaattcg
gtggcttggtacagcgcagcggaacagggttatgcgcagtcgctgcgactgcttggcgaa
aacgacatggaaatcgcacacgagggtacagatcttaaaccggaagtgctgcgcgatgag
tgtcagcaaccaaacgcgcatggcgagactgtgctcttggtacgcaccaaacggctcaat
tatctgccactggtggacttctatccgcgggactttgcgcgtacggatcaagcatttggt
ttcaaggtggggccagcatgcttcaaatga
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