Bactrocera dorsalis (oriental fruit fly): 105234120
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Entry
105234120 CDS
T09719
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Pathway
bdr03013
Nucleocytoplasmic transport
bdr03015
mRNA surveillance pathway
bdr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105234120
09122 Translation
03013 Nucleocytoplasmic transport
105234120
03015 mRNA surveillance pathway
105234120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdr03019
]
105234120
03041 Spliceosome [BR:
bdr03041
]
105234120
Enzymes [BR:
bdr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105234120
Messenger RNA biogenesis [BR:
bdr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105234120
Spliceosome [BR:
bdr03041
]
Complex C
Other components
EJC/TREX
105234120
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105234120
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
AAA_19
MoaE
Motif
Other DBs
NCBI-GeneID:
105234120
NCBI-ProteinID:
XP_011214694
UniProt:
A0A034WST2
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MADNDDLLDYEDEEQTETTVAEVPEAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCG
FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPTENVVYVLVMCHTRE
LAFQISKEYERFSKYMPAVKVGVFFGGLSIQKDEESLKGTTPHIVVGTPGRILALIRNKK
LNLKHLKHFILDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKEIRPVCKKFMQ
DPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMALA
QLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDM
PEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKILNEVQDRFDVNITELPDEIDLSSYI
EGR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggctgataatgatgatcttttggattatgaagatgaggagcagaccgaaaccacggtc
gctgaagttccagaagcgccaaagaaggatgtgaaaggcacatacgtgtcaattcacagt
tcgggtttccgtgacttcttgttgaagccagaaattttgcgtgcaatagttgattgcggt
tttgagcatccgtccgaagtgcaacacgagtgtataccccaggctgtactgggtatggat
atattatgccaggctaagtcgggtatgggtaagactgctgtttttgtacttgccacttta
caacagctggaaccgacagagaatgtggtatatgtattagtcatgtgtcacactcgtgaa
ttagcattccagatcagcaaagagtacgaaagattctccaaatacatgccggctgtaaag
gttggtgtattcttcggtggcttatctatacaaaaagatgaagaatctttgaagggtaca
acaccccacattgttgtgggtacccccggccgtattcttgctttgatacgcaataaaaaa
ttgaacttgaagcatttgaaacactttattcttgacgaatgtgacaaaatgttggaacaa
ctagatatgcgtcgtgatgtacaggagattttccgcagcactccacatggaaaacaagtc
atgatgttttccgccacattgagcaaggaaatacgtccagtgtgcaaaaaattcatgcaa
gatcccatggaagtttatgtggatgacgaagcaaaattgacattgcacggattgcaacag
cattacgttaaattgaaggagaacgagaaaaacaagaaattgttcgaattactggatgta
ctcgaatttaatcaagttgtaatttttgtaaaatcggtacaacgctgcatggcgctagcc
caattgcttactgaacaaaatttccccgcaattggcatacatcgtggtatgacccaagaa
gagcgtttaaaccgttatcaacagtttaaggatttccaaaaacgtattttggtggcaacc
aatctttttggacgtggtatggatatagaacgtgtcaacattgtatttaattatgatatg
ccggaagattctgacacttacctgcatcgcgttgcaagagctggacgtttcggtaccaaa
ggtttggcaataacatttgtttccgatgaagcagacgccaaaattttgaacgaagtgcaa
gaccgattcgatgtcaatatcactgaattaccggatgagatagatctatcttcatatatt
gagggacgataa
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