Bactrocera dorsalis (oriental fruit fly): 105234258
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Entry
105234258 CDS
T09719
Name
(RefSeq) uncharacterized protein LOC105234258
KO
K19026
spatacsin
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdr03400
]
105234258
DNA repair and recombination proteins [BR:
bdr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
105234258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
105234258
NCBI-ProteinID:
XP_049306880
LinkDB
All DBs
Position
3:complement(78783287..78795031)
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AA seq
1879 aa
AA seq
DB search
MSATYKRDKLFKSWTGISEVALIKEVATKGENIDLCIEYWARKRKLPIPEYEQFFQDVVQ
TYVHRLLTERLVCKAEMVLINVKRDVKSFYYQFACECDDEELRELVIEHLQKKDPQNYET
DMLQLQFYWDLLQQLQACPELLAKCKVQLRRVNIETLVHCDDSYLNKLLAELYFLNNNPQ
LLERLDKYSLWNYLVDEAKLAQLVRWCTLAGQLPQVEYTELEVLYCEWVLEAEMYEYALK
TLGTPNETIRNCFAAAGYLFADERDEVSVVVRRLCTTESLERNREILEKLPIGQFLLERG
LHMLLLRNFVKTRELEEMFAEYPDDEELLKFLVALKENKTDELEEFGKVFQATKSYLEHQ
GIDFNTEQPLVTLFDFLSNEPSVETLICFLHTTGLQNIPYLKTLPIRNPNHNSESNISTS
IDNCSNGQGKSMPTPYDFLRKFKHIDIKEISKELQTDTLASFSNEKLCAKFARKYKLNFL
HYLKQQRSCYAVYYLIMDHLQQYGQLTKGHLFTACETVTELALQHTNNSELVTHCVAFIE
MLGYDSQYLRNYLKLCRLLENEGDETSVVAKNYTQLFARVENLLVQQITKEPAKFPLKDY
QALMRLVACSGQRQWPMKVMQNYAKEDDWWRLLVLMQYFDVPLSQLQVLVGHFETRAMGE
HMLRAFLCELPAQVKRHASFSRQHKKPARKAEANPLTTSAETLTSSISSACNDPNSALFR
TAPSQQRLHFLPDACGRLDLFAIVLLSTTPINEEQVSSAGKFLELMQDQHTHATSWNLLR
NCVKYRLPVLAVLAATVHHANIEWQWLVWLAVATNQWTEVLKLSTLHIQQVTWLLVESAV
RHGDTSLLLRSFRIFFKDSAFTHLCHFLQRTQHKRHFDDEDVHTLRLFLLAWSNNAVVMP
FCATLERHELMQHSIRLLLVHLQHNFESTLEQQKLISCMCRSDMSDISVQMDFCRLHAVF
EALQTRPGWAECYTIDFEQLAVDNNQVYEQLLDALRAKGEYDVAVRLATLLQQPISDIVY
SKWVTKLESAESADGEEPYPVKTFQLYENEIAEHSLPPELLVNFYLYAAGRLTEPCARKY
QLLKRALTVIKQHHLFPNESFDRDQIEYEMFICYLQLDDDVAAAMGVYHSEYYEQIMLNE
RCVLYKSFLELKELAGVEDLNVSIKHPMTKQMEARLEAQLNLLLDKGDIVEALRLQELFE
CRPIDLRFVVFCMALAEGVTTIFSMSSEERQMLRDIEISSFAKFNKRTLDSGLLTREGRN
SPSKASSDLSDSCSTLEFEEIPSKEKRETLETIQGIASKLTYGVNIGRRIVMVYRAAMYL
DKEYLDVLRTKDTTVLLQSVSEEGCLHRLLVVSDIITSTHMTPQEIAELLATELATAIVR
PRFYIFTADQQAKNTIKNTPVWGYNIDRDLHLFLELVPNTTKLGNCLLEYCDALKAYRKF
QDNKPYEHNTVFERLAEIIRRYGLPTNSNGISTVIPPITTATNAGPMLPPAQVLSHKKQN
IIYVELLIKAHQCYVHECSMEGIANVLNRAKALNAVLTQAKSWSLIVRMLSGIGRYREMF
YCFDSLLKNEQFESLLGQFDEEKTIGLRQAIITYLREYCPNNGREYLKLTALHFLMYQEL
AEMWEQDAQAVLAKIINQAAVNTAQLPEKMSMANLTTANPTKTFIPKLRATPELLVLLQQ
AMEYYTHATENYLLDNKLLLAQRVASLAEMVAVQIDLASKALERNAMETHLCVCVVNVQT
REEFRELINAELSVPQTLILSRACGFDINWAEVLLSQYVILGHAHYLQEYLQHLQINDNI
IENTVKGFQLYAQHHRIGARMDEHLAQLVALVKSVALKYKLASVLSLKTIVMSLISEQTA
HYLRDTNFGRNENRNLNDM
NT seq
5640 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccacgtataaacgtgataaactcttcaaatcctggactggcattagtgaagtg
gcgcttattaaagaggtggccacaaagggtgaaaacattgatctctgtattgagtattgg
gcacgtaagcggaaactaccaataccggaatatgagcaattcttccaggatgttgtacaa
acgtatgtgcatcgactgcttactgaacgactggtgtgcaaggcggaaatggtattaatc
aatgtaaagcgggatgttaaaagcttctattatcagttcgcttgtgagtgtgatgatgag
gaactacgtgaacttgtaatagaacatctacaaaagaaagatccacaaaattatgagact
gatatgcttcaattgcaattctattgggatttgctgcagcaactacaagcatgtcctgaa
ttgctggcaaagtgcaaagtacaactacgacgcgttaatattgaaacgctggtgcattgc
gatgattcatacctcaataaattattagcggagttatattttttgaacaacaatccgcag
cttttggaacgtttagataaatatagcttatggaattatttggtagacgaagcgaaattg
gcacaattagtgcgttggtgcacattagcagggcagttgccacaagtggagtacacagaa
ttagaggtattatattgtgagtgggtactggaagcggaaatgtatgaatatgcattaaaa
acattagggacacctaatgaaacgatacgtaattgctttgccgcggccggatacttattt
gccgatgaaagagatgaagtgtctgtggtagtgcggcggctttgcactaccgaaagtttg
gaacggaaccgtgaaatattggaaaaactgccgataggacaatttttacttgagcgcggt
ctacacatgttgctactacggaattttgtgaaaacacgcgagttggaagagatgtttgcg
gaatatccggacgatgaggagttgctcaagtttttagtagcattaaaagaaaacaaaacc
gatgagttggaagagtttggaaaagtattccaagcgaccaaatcgtatttggagcatcaa
ggtattgattttaacactgaacaaccattagtcacattattcgattttctcagcaatgag
cccagtgtggagactttaatttgtttcttacacacaactggtttacaaaacattccatat
ttgaaaacattacccatcagaaatccaaatcataatagcgaatcaaatatatccacgagt
atagacaattgcagtaacgggcaaggtaaaagtatgcccaccccttatgattttctgcgc
aaattcaagcatatcgacataaaagaaatctccaaggaactgcaaacagacacgttagct
tctttctccaatgaaaagctctgcgcaaaatttgcgcgaaagtataaactcaactttctg
cattatttgaaacagcaacgcagctgttatgccgtctactaccttatcatggaccatctg
caacagtacggccaactaaccaaagggcatctctttaccgcctgcgaaactgtcaccgaa
ttggcattacagcacaccaacaactcggaattggtaacgcactgcgtcgccttcatcgag
atgctcggctatgattcacagtatttgcgtaattacctcaaattgtgtcgcttgctggag
aatgagggggacgaaacaagcgtggtggccaaaaattacacacagttatttgcgcgtgtg
gaaaaccttttggtacaacagattacgaaagaaccagccaaatttccactgaaagattac
caggcgctaatgcgcttagtcgcctgcagcggccaacgccaatggcccatgaaagtaatg
caaaattatgcgaaagaagacgattggtggcgcctgctggtgctcatgcaatactttgac
gtgccgctctcacaactacaagtgctagtgggacacttcgagacgcgcgccatgggcgag
catatgctgcgcgcctttttatgcgaattgccagcgcaggtgaagcggcatgccagcttc
tctcgtcaacataagaaacccgcacgtaaagctgaagcaaatccattaactacctccgct
gagacgctcacctcgtccattagttctgcttgcaatgatcccaatagcgcgctttttcgc
actgcacccagtcagcaacgcttgcatttcttgccggacgcttgcgggcgtctagatctc
tttgcgattgtgctgctcagcactacgcccataaatgaggagcaggtgagcagtgccggt
aaatttctcgagctcatgcaggatcagcatacacatgcgacttcatggaatttactgcgg
aattgtgtgaagtacagactgccagtattagcggtgctagccgccacagtgcatcatgcc
aatatcgagtggcagtggctggtttggctggctgtagccacaaatcaatggactgaagtg
ctgaaattgtccacgttgcatatacagcaagttacctggttgctggtggagtccgctgtg
cgtcatggagatacgagtctgctattgcgtagttttcgcatattcttcaaggacagcgct
tttacacatttgtgccactttctacagcgcactcaacacaaacgccacttcgacgatgaa
gatgtacacacgctacgtctctttctgcttgcttggagcaacaatgcagttgtaatgcct
ttctgcgccacactcgagcgccacgaactcatgcagcacagcatccgtttgctactcgtg
catttgcagcacaatttcgaatcgacgctggagcaacagaagctcattagctgtatgtgc
cgttccgacatgagcgacattagcgtccaaatggacttttgtcgtttgcacgccgttttc
gaagcgctccaaacgcgtcctggctgggccgaatgctacacgatcgatttcgagcaactt
gccgtagataacaatcaggtgtacgaacaacttttggacgctttgcgtgcgaaaggcgaa
tacgatgtcgccgtgcgtttggctacgctgctacagcaacccatcagtgatattgtctac
agcaaatgggtaacaaagctggagtcagctgaatcggctgacggcgaggaaccatatccg
gttaagacgtttcaactgtacgaaaatgaaatcgcggagcattcactgccgccggaattg
ctggtgaatttttatctttacgccgccggtcgccttaccgagccatgcgcgcgcaagtat
caactactgaagcgtgcgctaactgttataaagcagcatcatctctttccgaatgaatcg
ttcgatcgtgatcaaatcgagtacgaaatgtttatttgctatctacaactggatgatgat
gtcgcagctgcaatgggtgtttaccactcggaatactacgagcagatcatgttgaacgaa
cgttgtgtactctataagtcttttctcgaattgaaggagctcgccggtgttgaagatctc
aatgtcagcataaaacatccgatgaccaagcaaatggaggcgcgtctggaagctcaactt
aacttattgctggacaaaggtgatattgtggaggcattgcggctgcaagaactcttcgaa
tgccgtccaatcgatttgcgttttgtggtgttttgcatggcattggccgagggtgtgacc
accattttcagcatgtcttcggaggagcgccaaatgctgcgtgacatcgagataagttca
ttcgccaaattcaacaaacgcacgctggatagtgggctgctgacgcgcgaaggtcgtaat
tcgccctcgaaagccagcagcgatctctcagatagttgttcgactctcgagtttgaagag
ataccttccaaggagaagcgcgaaacgttggagaccatacaaggcattgcttccaagctc
acttatggcgtcaatattggacgtcgcattgttatggtctatcgcgctgccatgtatttg
gataaagagtatttggatgtgttgcgcacgaaggatacaacggtgttgttgcaaagcgtt
tccgaagaaggttgtctgcatcgtctgctggttgtgagtgatattataacatcaacgcat
atgacaccgcaggagatcgctgaactcctggccaccgaacttgccacagccatcgtgcgt
ccacggttctacattttcactgccgatcaacaagccaaaaacacgatcaaaaatacgccc
gtctggggctacaatatcgatcgtgatttgcatttatttctggaattagtacccaacacc
accaagctgggcaattgtctgcttgaatactgtgatgccttgaaagcatatcgtaaattc
caagataataaaccatacgaacacaatacggtatttgagcgactcgccgaaatcatacga
cgttacggcctgccgaccaacagcaatggtatttcgaccgtcataccaccgattaccacc
gccacaaatgccgggccgatgctaccgccggcgcaagtgctgtcacacaagaagcagaac
atcatctatgtggagctgttgatcaaggcacatcaatgctacgtgcacgagtgctccatg
gaaggcatagcgaatgtgttgaaccgcgccaaagccttaaacgccgtgctcacgcaagcc
aagtcctggtcgttaattgtgcgcatgctcagcggcatcggacgctaccgcgaaatgttc
tactgtttcgattcgctgctcaagaacgaacagttcgaatcgctgctgggccagtttgat
gaggagaagacaatcggtctgcgtcaggcaataatcacatatctacgcgaatattgtccg
aataacggtagagaatatttaaaattgacagcgctgcactttctcatgtatcaggagctg
gccgaaatgtgggagcaggatgcgcaagccgtgctggccaagatcatcaatcaagcggct
gtcaacaccgcacagctgccggagaagatgtccatggccaatttgacaacggcaaatccg
acaaaaacattcatacccaaactgcgtgccacgcccgagttgcttgtgctgctgcagcaa
gctatggaatattacacacatgcaacggaaaattatttgctcgacaataaattgttgttg
gcgcaacgcgtcgcctcgttggccgaaatggtggctgtgcaaattgatttggccagcaaa
gccttggaacgcaatgccatggagacgcatctatgtgtgtgtgtggtgaacgtgcagacg
cgtgaggaatttcgtgaactgatcaatgcggagctgagtgtgccgcagacgcttatactc
agtcgcgcttgcggcttcgacatcaactgggctgaagtgctgctctcgcaatatgttata
ctcgggcatgcgcattatctgcaggaatacttgcaacatttacagatcaatgacaatatc
attgagaatacagttaaaggctttcaactgtacgcgcagcatcatcgcatcggcgcgcgc
atggatgagcatttggcgcaattggtggctttggtcaagtcggtggcgctcaagtacaag
ttagcctcggtgctgagccttaaaacgattgtgatgtcgctgataagcgagcagaccgca
cactatttgcgcgacacgaatttcggacgaaatgagaatcgcaacttgaacgatatgtga
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integrated database retrieval system
