Bactrocera dorsalis (oriental fruit fly): 125775289
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Entry
125775289 CDS
T09719
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Pathway
bdr03022
Basal transcription factors
bdr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125775289
09124 Replication and repair
03420 Nucleotide excision repair
125775289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdr03021
]
125775289
03400 DNA repair and recombination proteins [BR:
bdr03400
]
125775289
Transcription machinery [BR:
bdr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
125775289
DNA repair and recombination proteins [BR:
bdr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
125775289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
IBR
VWA
Motif
Other DBs
NCBI-GeneID:
125775289
NCBI-ProteinID:
XP_049313859
UniProt:
A0ABM3JXA9
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Position
5:complement(52382757..52384326)
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AA seq
396 aa
AA seq
DB search
MADIDGEDPKEYRWETGYEKTWEAIKEDDDGLLDGAIAEIIQKAKRKRQAQKTQQNRLGM
MRHLYIVLDCSESMTVPDLKPTRMLCTIKLLEIFIEEFFDQNPISQLGLIVLKGKRAEKL
TELTGTSKLHLKALEGVSKIPLTSEPSLQNGLDLAMKALKVVPSHASREILIIMGSLTTC
DPVDINSTINALKADNIRCSVISLSAEIHVCRHLTQQTDGSYGAVLDDAHFRDQLLAHVD
PPPAAQTQENSLIKMGFPHAKTDGGKDPPLSMCMCHIENTEEPSKLTSGGYHCPQCFSKY
CELPVECQTCGLTLVSAPHLARSYHHLFPVQHFTELEFNGQAANCYACQKPLTEAMDKNV
YRCEKCAQVYCIDCDIFIHETLHTCVGCNTGNSNRN
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggcagatatagatggagaagatcctaaagaatatcgctgggaaactggctacgaaaaa
acatgggaagctataaaggaagatgatgacggtcttttggatggcgccattgcagagatt
attcaaaaggctaaacgcaaacgacaggcacaaaagacacaacaaaatcgtttgggaatg
atgcggcacctttatattgttttggattgctctgaatccatgactgtcccagatttgaaa
cctactcgaatgttatgcaccattaagcttctggaaatttttatcgaggagttctttgat
caaaatcctatcagccagttgggtctaattgttctgaaaggcaaacgcgccgaaaaactc
acggaactaaccggcacatcaaaacttcatttgaaggccctggaaggcgttagtaaaatt
ccacttacgagtgagccttcgttgcaaaatggtcttgacttagctatgaaagcgttaaaa
gtcgtgcccagtcatgcttcccgagaaatactcataattatgggttccttgaccacatgc
gatcctgttgacattaatagtactataaatgcccttaaagcagataacatacgatgctct
gtgatttcactatctgctgaaatacatgtctgccggcatttaactcaacaaactgacggc
tcttatggtgctgtgcttgatgatgctcatttccgtgaccagttattagcacatgtagat
ccgccaccagcagcgcaaacccaagaaaattctttaataaaaatgggttttcctcatgct
aagacggatggtggcaaggatccaccactttcaatgtgtatgtgccacatagaaaataca
gaggaaccgagtaagctaacatcaggtggttaccattgcccgcagtgctttagtaaatat
tgcgaattgccggttgaatgtcagacatgtggcttaacattggtttcagcgccacatttg
gctcgatcctatcatcatctctttccagtgcagcatttcaccgagttggaattcaacggg
caagcggcgaattgttatgcatgccagaaacctctaacggaagcaatggataaaaatgta
taccgatgtgagaaatgcgctcaagtttattgtattgattgcgatatattcattcatgag
actttgcatacatgcgtcggttgcaacacaggaaattcaaatagaaactag
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