Bacteroides difficilis: ACNOGP_03735
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Entry
ACNOGP_03735 CDS
T11389
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bds Bacteroides difficilis
Pathway
bds03030
DNA replication
bds03410
Base excision repair
bds03420
Nucleotide excision repair
bds03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bds00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACNOGP_03735 (polA)
03410 Base excision repair
ACNOGP_03735 (polA)
03420 Nucleotide excision repair
ACNOGP_03735 (polA)
03440 Homologous recombination
ACNOGP_03735 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bds03032
]
ACNOGP_03735 (polA)
03400 DNA repair and recombination proteins [BR:
bds03400
]
ACNOGP_03735 (polA)
Enzymes [BR:
bds01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACNOGP_03735 (polA)
DNA replication proteins [BR:
bds03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ACNOGP_03735 (polA)
DNA repair and recombination proteins [BR:
bds03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ACNOGP_03735 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACNOGP_03735 (polA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
DNA_pol_lambd_f
HHH_5
HTH_60
HHH
DUF2972
Motif
Other DBs
NCBI-ProteinID:
XPI37184
LinkDB
All DBs
Position
975833..978625
Genome browser
AA seq
930 aa
AA seq
DB search
MDSDNKLFLLDAYALIYRAYYAFIKNPRINSKGFNTSAILGFVNTLEEVLKKENPTHIGV
AFDPSGPTFRHEAFEQYKAQREETPEAIRLSVPIIKDIIRAYRIPILEVAGYEADDVIGT
LATEAGRQGITTYMMTPDKDYGQLVSDKVFMYRPKHTGGFEVMGVEEVKAKFDIKSPAQV
IDMLGLMGDSSDNIPGCPGVGEKTAQKLIAEFGSIENLLEHTDQLKGALKTKVETNREMI
TFSKFLATIKTDVPIQLEMDALVREQPDEEALRSIFEELEFRTLIDRVLKKETSAPLPLF
PEKSEGIQGDLFANFTGNEPSEAKKSNLETLESLCCDYQLIDTEEKRKEIIQKLLTSKIL
SLDTETTGTEPMDAELVGMSFSINENEAFYVPVPANQEEALKIVNEFRPVFENESSLKVG
QNIKYDMIVLQNYGVEVKGPLFDTMIAHYVLQPELRHGMDYLAEIYLHYQTIHIDELIGP
KGKNQKNMRDLAPKDVYRYACEDADVTLKLKNVLEKELKENGAERLFYDIEMPLVPVLVN
IERNGVLLDTEALKQSSAHFTEQMERIEKEIYDLAGETFNIASPKQVGEVLFDKLKIVEK
AKKTKTGQYVTSEEVLESLRHKHPVVEKILEHRGLKKLLGTYIDALPQLINPRTGRVHTS
FNQTVTATGRLSSSNPNLQNIPIRDENGKEIRKAFIPDEGCLFFSADYSQIELRIMAHLS
EDKNMIDAFLSNHDIHAATAAKIYKIDLKDVDSDMRRKAKTANFGIIYGISVFGLAERMN
VERKEAKELIDGYFETYPGVKAYMDQSIRVAQEKGYVETIFHRKRFLPDINSRNAVVRGY
AERNAINAPIQGSAADIIKVAMARIYQRFRAEGIKAKMILQVHDELNFSVPIDEKERVEE
IVIEEMEKAYRMHVPLKADCGWGKNWLEAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggattcagataataaattatttcttttagacgcttatgcactgatataccgtgcatac
tacgcctttatcaaaaaccccagaatcaactccaaaggattcaatacttcagccatacta
ggctttgtgaataccctcgaagaggtgctgaaaaaagagaacccgacgcatataggagtg
gctttcgacccttcggggcctaccttccgccacgaagctttcgaacaatataaagcacaa
cgcgaagaaactccggaagcaatccgattatccgtacctattataaaggatattatccgt
gcttatcgcattcctattctggaggttgccggttacgaagccgatgacgtgataggaaca
cttgctaccgaagccggtcgtcaaggcatcactacttatatgatgacacctgataaggat
tacggacaattggtaagtgacaaggtattcatgtaccgtcccaaacatacgggaggcttt
gaggtaatgggagtggaagaagtgaaagccaagttcgatattaagtctccggcacaagtg
attgatatgctcggtctgatgggcgactcttcggataatatccccggctgtcccggcgta
ggcgaaaagaccgctcagaaactgattgccgaattcggaagtatcgagaacctattggag
cataccgaccaactgaaaggagcattaaagacaaaagtggaaacgaatcgggagatgata
acattttctaaattcctggcaactatcaaaaccgatgtacctatccaacttgagatggat
gcgctcgttcgcgagcaaccggacgaagaggcgcttcgttccatcttcgaggaactggaa
ttcagaacacttatcgaccgggtacttaaaaaagagacttccgctcctctcccactcttt
cccgaaaaaagtgaagggatacaaggcgatttatttgcaaatttcacgggcaacgagccg
agtgaagccaaaaaatcgaatctagagacgttagaatcgctctgttgtgactatcaactc
attgatacagaagagaaaagaaaggaaattattcaaaagttacttacatctaaaattctc
tcgttagatacggaaaccaccggaacggaaccgatggatgcagaattggtcggaatgagt
ttctccattaacgaaaatgaagcattttatgtcccggttcccgcaaaccaagaagaagcg
ttaaaaatcgtcaatgagtttcgaccggtattcgaaaacgaaagttcgctgaaagtgggg
caaaatatcaagtacgatatgattgttctccaaaattatggagtggaagtaaaaggtccg
ctcttcgacacaatgattgctcactatgttcttcaaccggaacttcgtcacgggatggat
tatctggcagaaatctatttgcattatcagacgattcatatcgatgagttgatagggcca
aaaggtaaaaaccagaagaatatgcgcgaccttgctccgaaggatgtttaccgctacgct
tgcgaagatgcagacgtaacgctgaaattgaaaaacgtactggagaaggaattgaaagag
aatggcgccgaacgtttgttctatgatatcgaaatgcctctcgtcccggtattggtcaat
atagaaagaaacggagtgttattggatacggaagcattgaaacagtcgtccgctcatttt
acagaacagatggaacgcatcgaaaaagagatttatgatctggcaggcgagactttcaat
atcgcttcgccgaaacaggtcggtgaagttctgttcgataagctgaagattgtagaaaaa
gccaaaaagacaaagacagggcaatatgtcacttcggaagaggttctcgaaagtcttcgc
cacaaacatccggtggtggagaaaattctggaacaccgcggactgaagaagttactggga
acgtatatcgacgcactcccccaacttatcaatccacgtacgggaagggtacatacttct
ttcaatcagactgtcaccgctacaggacgtctcagctcaagcaatccgaacttacagaat
atccccatacgcgacgagaacggaaaagagatccgtaaagcatttattccggatgaaggt
tgtcttttcttttccgccgactattcacagatcgagctacggattatggcacatctcagt
gaggataagaatatgatcgacgccttcctcagtaatcatgacatccacgctgcaacagcc
gctaagatttataagattgatctgaaggatgtggattctgatatgcgccgcaaagcaaaa
accgccaatttcggtattatatatggtatatctgttttcggacttgccgaacggatgaat
gtagaacgaaaagaagccaaagaattaatcgacggttactttgaaacctatcccggagta
aaggcctacatggatcagagtatccgggtggctcaagagaaaggatatgtggaaacgatt
ttccaccggaaacgtttcttaccggatatcaactcccggaatgcagtcgtacgcggatat
gcggaacgaaacgctatcaatgctcctattcagggaagcgcggccgatattatcaaggtg
gctatggcacgtatttaccaacggttccgggcagaaggaataaaagccaaaatgattctg
caagtacacgacgaattaaatttcagtgtccccattgatgagaaagaacgggtagaagaa
atcgttatcgaagaaatggaaaaagcataccgtatgcacgttcccttaaaagcggattgc
ggatggggaaagaactggctcgaagcacattaa
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