Bacteroides difficilis: ACNOGP_13215
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Entry
ACNOGP_13215 CDS
T11389
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
bds Bacteroides difficilis
Pathway
bds03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bds00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACNOGP_13215 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bds03400
]
ACNOGP_13215 (uvrB)
DNA repair and recombination proteins [BR:
bds03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACNOGP_13215 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACNOGP_13215 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
EAD4
Kinesin
Motif
Other DBs
NCBI-ProteinID:
XPI34865
LinkDB
All DBs
Position
complement(3469728..3471761)
Genome browser
AA seq
677 aa
AA seq
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MNFELTSAYKPTGDQPEAIAQLTEGVLQGVPAQTLLGVTGSGKTFTIANVIANINKPTLI
LSHNKTLAAQLYGEFKGFFPNNAVEYYVSYYDYYQPEAYLPSSDTYIEKDLAINDEIDKL
RLAATSALLSGRKDVVVVSSVSCIYGMGNPSDFYKNVIEIERGRMIDRNVFLRRLVDSLY
VRNDIDLNRGNFRVKGDTVDIYLAYTDNLLRVTFWGDEIDGIEEVDPVSGVTVAPFEAYK
IYPANLFMTTKEATLRAIHEIEDDLTKQVAFFESIGKEYEAKRLYERVTYDMEMIRELGH
CSGIENYSRYFDGRAAGTRPYCLLDFFPDDFLIVIDESHVSVPQIRAMYGGDKARKINLV
EYGFRLPAAMDNRPLKFEEFQEMAKQVIYVSATPADYELIQSEGIVVEQVIRPTGLLDPI
IEVRPSLNQIDDLMEEIQLRIEKEERVLVTTLTKRMAEELTEYLLNNNIRCNYIHSDVDT
LERVKIMDDLRQGIYDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRSHRSLTQTAGRA
ARNVNGKVIMYADKITDSMRLTIDETNRRREKQLAYNEANGITPQQIKKARNLDVFGNAN
SETNELLKEKQAYIEPTTPNIAADPVVQYMSKAQMERSIERTRKLMQEAAKKLEFIEAAQ
YRDELLKLEDLMKEKWG
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgaactaacatcagcttataaacctaccggagaccagccggaagcaatcgca
caactgactgaaggggtacttcaaggagttcccgcacagactttattgggggtcacagga
tcgggaaaaacatttaccattgccaatgtaatcgctaatatcaataagccgacattgatt
ttgagtcataataagacgctggctgcccaattatatggagagtttaagggattctttccg
aataatgcggtggaatattacgtttcttactacgattattaccagccggaagcctatttg
cctagcagcgatacttatatagaaaaggatcttgccatcaatgacgagatagacaagctc
cgtctcgccgcaacttccgccctactctccggacgaaaagacgtagtagtggtctcttcc
gtttcctgtatctatggtatgggaaacccttcggacttttataaaaatgtgattgaaata
gaacggggacgcatgattgaccgcaatgttttcctccgccgcctggtagacagtctgtat
gtccgcaacgatatcgaccttaatcgtggtaatttccgcgtcaaaggagatactgtggat
atttatctggcatatacggacaacctgttgcgcgtcacattttggggagacgagattgat
ggcatagaggaggtagacccagtcagcggagtcactgtcgcccccttcgaggcttataag
atttatcccgccaatttgttcatgactactaaagaggcaaccctccgagccattcatgag
atagaagatgatttgaccaaacaggtcgctttctttgagtctatcggcaaagaatatgaa
gcgaaaagactatacgagcgtgtcacatacgatatggaaatgattcgggaattgggacat
tgctccggcattgagaattattcccgctatttcgacggtcgtgctgcaggtacccgtcct
tattgtctgctggatttctttccggacgattttctgattgtcattgacgaaagccatgtc
agtgttcctcagatccgtgcaatgtacggaggcgacaaggcacgtaaaatcaatcttgtg
gagtatggtttccgcctacctgccgccatggataaccgaccgttgaaatttgaagaattt
caggaaatggcgaagcaagtgatctatgtcagcgctacaccggcagactatgaactcatc
caatccgaagggattgtagtggaacaggtaatccgtcctaccggactgttggacccgatt
attgaagtacgcccgagcttgaaccagatcgatgatctgatggaagaaattcaactgcgt
attgagaaagaagagcgtgttcttgttactactcttaccaagcgcatggcggaggagcta
actgaatatctcctcaacaataatataaggtgtaattatattcatagcgacgttgatact
ctcgaacgtgtaaaaatcatggatgacctccgacagggaatttacgatgtgctgatcggg
gtcaatctgctacgtgaaggtctcgatttgccggaagtatctcttgtagctatccttgat
gcagacaaggaaggcttccttcgttcccatcgttcgttgacgcagacagccggacgtgca
gcgcgtaatgtgaacggaaaagtaatcatgtatgccgataaaattacggacagcatgaga
ctgaccatcgacgagaccaatcgtcgacgagagaaacagttggcatacaatgaggcaaac
ggcattactccacagcagatcaagaaagcgagaaacttggatgtattcggcaatgctaat
tcggaaacaaatgaattgctgaaagaaaaacaagcctatattgaaccgacaactccgaac
attgcggcagatccggtagtacagtatatgagtaaagcacaaatggaaaggagtatcgaa
cgtacgcgcaaactaatgcaggaagcagccaaaaagcttgaatttattgaagctgcccaa
tatcgtgacgaattattaaaattggaagacttaatgaaagagaaatggggatag
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