Bacteroides difficilis: ACNOGP_20795
Help
Entry
ACNOGP_20795 CDS
T11389
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bds Bacteroides difficilis
Pathway
bds03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bds00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACNOGP_20795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bds03019
]
ACNOGP_20795
Enzymes [BR:
bds01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACNOGP_20795
Messenger RNA biogenesis [BR:
bds03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACNOGP_20795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XPI36272
LinkDB
All DBs
Position
complement(5290105..5291229)
Genome browser
AA seq
374 aa
AA seq
DB search
MTFRDLNIIEPILKAIEEKGYTVPTSIQEKAIPAALAKRDILGCAQTGTGKTASFAIPII
QHLQANKETDKRRGIKALILTPTRELALQISECIDDYSKYTHVRHGVIFGGVNQRPQIDM
LHKGIDILVATPGRLLDLMNQGYIHLTNIEYFVLDEADRMLDMGFIHDIKRILPKLPKEK
QTLFFSATMPDSIIVLTKSLLKNPVKIYITPKSSTVDSIKQIIYFVEKKEKSQLLISILQ
KAEDQSVLIFSRTKHNADKIVRILGKAGIGSQAIHGNKSQAARQSALGNFKSGKTKVMVA
TDIASRGIDINELPLVINYDLPDVPETYVHRIGRTGRAGNEGTALTFCSQEERKLVNDIQ
KLTGKKLNKADFAI
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgacatttagagatttaaatataatcgaaccgattttaaaagcaattgaagaaaaagga
tatactgtcccaacatctattcaagaaaaagcaattcctgccgcattggcgaaaagagat
atattaggttgtgcgcaaacaggaacaggaaagaccgcttcgtttgcaattcctattatc
cagcatttgcaggcaaataaagagacagataaacgtcggggtatcaaagcgctgatatta
acgcctacccgtgagcttgctttgcaaatcagtgagtgcattgatgattattcaaaatat
acccatgtgcgtcatggagttatttttggtggtgtgaatcaacgtcctcagattgatatg
ttacacaaaggaattgatattctagtggcaactccgggccgcttgcttgatttgatgaat
caagggtatattcatctgactaatatagaatattttgtgcttgatgaggcagatcgtatg
ctcgatatgggttttatacatgatatcaagcgaatattgccgaaacttccgaaagaaaag
caaacgctgtttttttcagcaacaatgccagatagtattattgttttgacaaaatctcta
ttgaagaatccggtgaagatttatataacaccaaagtcgtcaacagtagattcaatcaag
caaattatttattttgtggagaagaaggaaaaaagccagctattaatttcgattctgcaa
aaggcggaagaccagtcagtgctcatcttttcacgaacaaagcataatgctgataaaatt
gttagaatattaggtaaggcagggattggaagtcaagctattcacggaaacaaaagccaa
gcagcgagacagtctgcattggggaactttaaatcgggaaagacgaaagtaatggtggct
accgatattgcttccagaggtattgatattaatgaattgccgttggttattaattatgat
cttcctgatgttcccgaaacttatgtacatcgtatcggtcgtacgggaagagctggaaat
gaaggtacagcacttacgttttgctcgcaggaagagcggaaactggttaatgatattcag
aaattgacagggaagaaactgaataaagctgattttgctatttga
DBGET
integrated database retrieval system
