Borrelia duttonii: BDU_505
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Entry
BDU_505 CDS
T00768
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bdu
Borrelia duttonii
Pathway
bdu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bdu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BDU_505 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdu03021
]
BDU_505 (rpoA)
03400 DNA repair and recombination proteins [BR:
bdu03400
]
BDU_505 (rpoA)
Enzymes [BR:
bdu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BDU_505 (rpoA)
Transcription machinery [BR:
bdu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BDU_505 (rpoA)
DNA repair and recombination proteins [BR:
bdu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BDU_505 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
CT0912-like_C
Motif
Other DBs
NCBI-ProteinID:
ACH93446
UniProt:
B5RM60
LinkDB
All DBs
Position
520838..521869
Genome browser
AA seq
343 aa
AA seq
DB search
MSLGKLLKDFTIPDRIEFVRGEDDGSYGKFIIYPFEKGFGVTIGNTLRRVLLSSIEGYAI
SAMRIQSNQEESLKIVSSEFDLIPGVMEDTLEVIANIKNVHLKLDEGVTNTTINLSVNGK
DNNVLKAGHLEREGVEVFNKDLVIATLSSDANLDFEFQVNYGRGYVSSEQNAKYLEEVNT
IALDSIFSPIEKVTYSVEDTRVGQRSDYDKLVMEIWTTGVISAKDAIKKAASVVREFLLP
LVNFEDKVIHSVDYAEFRDSDILSMNVEKLNLSVRSLNCLIKENVKTLGELISKSPVELS
KARNFGKKSLEEIVEKLNAYGLFLGMSKVEALKVLSKHDKISH
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaggaaagcttttaaaagattttactatacctgataggattgaatttgtgagg
ggagaggatgatggctcttatggaaaatttataatatatccttttgagaaaggttttggt
gttactattggaaatactttaagacgtgtattattgtcttctattgagggatatgctatt
tcggctatgagaattcaatctaatcaagaagagtctttaaagattgtttcaagtgaattt
gatttaatccctggagttatggaagatactcttgaagtaattgctaatattaaaaatgtt
catttaaagttggatgaaggagttacaaatacaacaataaatctttctgttaatgggaag
gataataatgttttaaaagcaggtcatcttgagagagaaggtgttgaagtttttaataaa
gatttagttattgccacactttcaagtgatgcaaatttagattttgaatttcaagttaat
tatggaagaggatatgtttcttctgaacaaaatgcaaaatatttagaagaagttaatact
attgctcttgattctatattctctccaatagaaaaagtaacatattctgttgaggatact
agagttggacagagatctgattatgataaacttgttatggaaatttggacaacaggtgta
attagtgctaaggatgcaattaaaaaggcagcttctgtagtaagagagtttttacttcca
ttagttaattttgaagataaagttattcattctgttgattatgctgaatttagagattct
gacatacttagtatgaatgttgaaaaattaaatttgtctgttagatctcttaactgttta
attaaggaaaatgttaagactttaggggaacttattagcaaaagtcctgtagagctttca
aaggcaagaaattttggaaaaaagagtttagaagagatagttgaaaagcttaatgcttat
gggttatttttgggaatgtctaaggtagaagctcttaaagtattaagtaaacacgataaa
atatctcattaa
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