Bdellovibrio bacteriopascens: QJS83_03630
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Entry
QJS83_03630 CDS
T11753
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bdv Bdellovibrio bacteriopascens
Pathway
bdv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bdv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QJS83_03630 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdv03021
]
QJS83_03630 (rho)
03019 Messenger RNA biogenesis [BR:
bdv03019
]
QJS83_03630 (rho)
Transcription machinery [BR:
bdv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
QJS83_03630 (rho)
Messenger RNA biogenesis [BR:
bdv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QJS83_03630 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
AAA
ATPase_2
AAA_22
NACHT
Spore_III_AA
S1CSD-TOTE-2
ResIII
AAA_14
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
WII73945
LinkDB
All DBs
Position
complement(755473..756750)
Genome browser
AA seq
425 aa
AA seq
DB search
MTDEEKTWLSSKDLKSKNITQLTELATKLKIENAAGLRRQDMIFEILKRAAKLGQDIYGS
GVLEILPDGYGFLRSPDYNYLPGPDDIYVSPSQIRRFGLRTGDTVTGTVRPPKEGERYFA
LLKVDSLNFETTEKGKDKILFDNLTPLYPNERLKLEHSPGEYTTRVVDLMAPLGKGQRAL
IVAPPRTGKTVLMQQIANAITHNHPEVKLIVLLIDERPEEVTDMQRTVKGEVVSSTFDEP
PTRHVQVAEMVIEKAKRLVEHKHDVVILLDSITRLARAYNTVVPPSGKILSGGVDSNALH
KPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNAEIHLDRKLMEKRIF
PCMDINKSGTRKEDLLVERADLNRLWVLRKVLAPMNVVDAMEFLIDKVQGTKTNTDFLKA
MSGPG
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
ctgactgatgaagaaaaaacatggctttcttcaaaagaccttaaatctaaaaacatcact
cagctcacagagcttgcgacaaaattaaaaattgaaaacgctgccggccttcgccgtcag
gatatgatctttgaaattttgaaacgtgctgcgaagctgggtcaggacatttatggttct
ggcgttcttgaaatcttgcctgacggttacggtttcttgcgttctccagattacaactat
cttccaggtccggatgatatctacgtcagcccatcacaaattcgccgcttcggtttaaga
acaggtgatactgtgactggtactgttcgtccgccaaaagagggtgagcgttacttcgca
cttctcaaagttgattctttgaacttcgagacgacggaaaagggtaaagataaaatcctt
ttcgacaacttaactccgctttatccaaatgaaagactgaaacttgagcacagccctggc
gagtacacgacacgcgttgtggacttgatggctccgcttggaaaaggtcagcgtgcattg
atcgtggcacctccaagaactggtaaaacagttttgatgcaacaaattgctaacgctatc
acgcacaatcaccctgaagtgaagttgatcgttctattgatcgatgaacgtccggaagag
gtgactgacatgcaacgtactgtaaaaggtgaagttgtatcgtcaacattcgacgaacca
ccaactcgccacgttcaagttgcagagatggttatcgaaaaagcaaaacgtctggttgag
cacaagcatgacgtggttatcttgcttgattccatcactcgtctggcgcgcgcttacaac
acggttgttcctccttctggaaaaatcttgtcgggtggtgtggattccaacgcccttcat
aaaccaaaacgtttcttcggtgcggctcgtaacattgaagaaggtggatctttgactatc
atcgcaacagcgttgatcgacacgggttctcgtatggatgaggttatcttcgaagaattt
aagggtacaggtaacgccgagatccacttggatcgtaagcttatggaaaaacgtatcttc
ccttgtatggacatcaacaaatcgggtactcgtaaagaggacttgttggttgaaagagca
gatctcaatcgcctatgggttttgagaaaagttttggcgccaatgaacgtcgttgatgcg
atggaattcttgatcgacaaagttcaaggcacgaagacaaacaccgacttccttaaggca
atgtctggtcctggctag
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