Bradyrhizobium dasycarpae: ACETMP_04325
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Entry
ACETMP_04325 CDS
T11709
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
bdy Bradyrhizobium dasycarpae
Pathway
bdy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bdy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACETMP_04325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdy03400
]
ACETMP_04325
Enzymes [BR:
bdy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ACETMP_04325
DNA repair and recombination proteins [BR:
bdy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ACETMP_04325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
XHA11998
LinkDB
All DBs
Position
complement(844457..845227)
Genome browser
AA seq
256 aa
AA seq
DB search
MKIATFNINNINRRLPNLLAWLRAAKPDVVALQELKASDGEFPAAAIEKVGYGAVWRGQK
TWNGVAILARNAAPILTRDRLPGRPGDHDARYIEAAVRGIIVTSIYLPNGNPQPGPKFDY
KLDWFGRLKRHANTFIKQDLPVVLAGDYNVAPTEIDIYPTRSWDKDALVQPRSRAAYASL
VSQGWCDAIRELHPDKRIYTFWDYKRNRWPRDAGLRLDHLLLSPALASRLAKAGVDKKVR
GEEGASDHAPAWVVLR
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgcgacattcaacatcaacaacatcaaccgccgcctgcccaacctgttggca
tggctgcgcgcggcgaagcccgatgtcgtcgcgcttcaggaattgaaggcaagtgatggc
gaatttccggcagcagcgatcgaaaaagtcggttatggcgcggtgtggcgcggacagaag
acctggaacggggtcgccatcctcgcccgcaacgccgcgcccatcctgacccgcgatcgc
ctgcccggaagacctggcgatcacgacgcccgctacatcgaggcggccgtgcgcggcatc
atcgtcaccagcatctatctgcccaacggcaatccgcaaccgggaccgaaattcgactac
aagctcgactggttcgggcgcctcaagcgtcacgccaacactttcatcaagcaggatctg
cccgtcgtgctcgccggcgactacaacgtcgcgcccaccgagatcgacatctatccgacg
cgctcatgggacaaggatgcgctggtccagcccaggagccgcgcggcctatgcctcgctg
gtctcgcaaggctggtgcgatgcgatccgcgaattgcatccggacaagcgcatctacacg
ttctgggattacaagcggaaccggtggccgcgcgatgcgggcctgcggctcgatcatctc
ctgctcagccctgccctggcctcacggctggcgaaggctggcgtcgacaagaaggtgcgc
ggcgaggaaggggccagcgatcacgcgccggcatgggtggtgctgcggtga
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