KEGG   Bradyrhizobium dasycarpae: ACETMP_11280
Entry
ACETMP_11280      CDS       T11709                                 
Name
(GenBank) sigma-54-dependent transcriptional regulator
  KO
K19641  two-component system, NtrC family, response regulator HupR/HoxA
Organism
bdy  Bradyrhizobium dasycarpae
Pathway
bdy02020  Two-component system
Brite
KEGG Orthology (KO) [BR:bdy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ACETMP_11280
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:bdy02022]
    ACETMP_11280
Two-component system [BR:bdy02022]
 NtrC family
  HupT-HupR (hydrogenase synthesis regulation)
   ACETMP_11280
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 HTH_8 HTH_50 AAA_5 AAA_2 AAA YphG_2nd HTH_35 AAA_16 DUF2089 nSTAND3 Phage_CP76 AAA_3
Other DBs
NCBI-ProteinID: XHA13133
LinkDB
Position
complement(2273173..2274609)
AA seq 478 aa
MSVLGTILVVDDEVRSQEALRRVLREDFEVLCAGNAADAEKLLEGEIVHAILCDQRMPHE
SGVSFLKRVRELWPDPVRMIISGYSDSEDIIAGLNEAGIYQYITKPWQPERLVDIVKEAV
QLYRLQKETETAGVDVKATPGHIKKVVSVKRGVAKQLYDFDRIVHSPESPMHKVIELGRR
AADYDISVLITGESGTGKELLARAIHYGSARANKAFVVENCGALPDELLESELFGCKKGA
FTGAYQDRIGLFEVADGGTIFLDEIGETSPAFQVKLLRVLQESEIRPLGAQRVRKVDVRV
VAATNRDLEAEVEAGRFRRDLYYRLAAFPVHMPALRERPMDVSLIAEGVLSSVKTSFNRP
GLRFAASALEAFARYHWPGNVRELQNEIQRMVVLADADELQAPPLLGRRNGKPPAAAIQG
KLNGSATLKDKVEDLEKAVIISTLERYEGNISRVANELGLSRVGLRNKLSRYDLRKNA
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgagcgttctgggaaccattctcgtcgtcgacgacgaagtccgctcgcaggaagcgctg
cgccgcgttctcagggaggatttcgaggtgctgtgcgccggcaatgcagccgacgcggag
aagctgctggaaggcgagatcgtccacgccatcctctgcgaccagcgcatgccgcatgaa
tcgggcgtgagcttcctgaagcgcgtgcgcgagctgtggcccgatccggtgcggatgatc
atctccggctattccgattcggaggatatcattgccggcctcaacgaggccggcatctat
cagtacatcaccaagccctggcagccggagcggctggtcgacatcgtcaaggaggcggtg
cagctctatcgcctgcagaaggagacggaaaccgccggtgtcgacgtcaaggcgacgccg
gggcatatcaagaaggtcgtctcggtcaagcgcggggttgccaagcagctctatgatttc
gaccgcatcgtgcattcgccggaaagtcccatgcacaaggtgatcgagctcggcaggcgc
gccgcagactacgacatctccgtgctgatcacgggcgagtccgggaccggcaaggagctg
cttgcgcgcgcgattcactacggctcggcgcgcgccaacaaggcgttcgtggtcgagaat
tgcggcgccttgccggacgaactgctcgaaagcgagctgttcggctgcaagaagggcgcc
ttcaccggcgcctaccaggacaggatcgggctgttcgaggtcgccgacggcggcaccatc
ttcctcgacgagatcggcgagacctcgccggcattccaggtcaagctcttgcgcgttctg
caggagagcgagatcaggccgctcggcgcacagcgggtgcgcaaggtcgacgtccgtgtc
gtggccgcgaccaaccgggatctcgaagccgaggtcgaggcgggccgcttccggcgcgat
ctctattatcgcctggcggcgtttcccgtccacatgccggccttgcgcgagcgcccgatg
gatgtctcgttgatcgccgaaggggtgctgtcgtcggtgaagacctccttcaatcggccg
ggcctgcgctttgccgcctccgcgctcgaggccttcgccaggtaccattggcccggcaat
gtccgcgagctgcagaacgagatccagcgcatggtggtgctggcggacgcggatgaattg
caggccccgccgctgctcggccggcgcaacggcaagccgccggcggcggcgatccagggc
aaattgaacggctcggcgaccctcaaggacaaggtggaagatctggagaaggcggttatc
atcagcactctggagcggtacgaaggcaatatcagccgggtcgccaacgagctcgggttg
tcgcgcgtcgggctcaggaacaagctgtcccggtatgatttgaggaagaatgcctga

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