Bradyrhizobium dasycarpae: ACETMP_23455
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Entry
ACETMP_23455 CDS
T11709
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
bdy Bradyrhizobium dasycarpae
Brite
KEGG Orthology (KO) [BR:
bdy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bdy03009
]
ACETMP_23455
Enzymes [BR:
bdy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
ACETMP_23455
Ribosome biogenesis [BR:
bdy03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
ACETMP_23455
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_25
Methyltransf_31
Methyltransf_11
MTS
Methyltransf_12
Methyltransf_23
FtsJ
ApbA
Methyltransf_15
RsmF-B_ferredox
SAM_MT
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
XHA09663
LinkDB
All DBs
Position
4898207..4899553
Genome browser
AA seq
448 aa
AA seq
DB search
MPSQRFAPPPEVPGLAARRIAADIVDGVLHKRRTLDDQLDGSGAHPGLKSLADRDRALMR
RLVATVLRRLGTLGHVLSRLLDKGIPSDAPRAQSALLIGAAQILWMDVPDHAAVDLSVRL
VQSDRRAARYAGLINAVLRRCAREGKALVEEVATQSLDLPPWLLARWSAHYGEATAREMA
LALGHEPSLDLTVKSDPAQWASRLHGEMLPTGTVRMLLHGSVTMLPGFTEGQWWVQDAAA
ALPARLFGDVKGKSIADLCAAPGGKTAQLALAGAQVTAIDRSPARVARLRENLARLSLQA
ETVVADAVEWAGPAEGFDGVLIDAPCTSTGTIRRHPDVAWLRQESDIAPLTALQQRLLRK
SVSLLKPGGTLIYCTCSLEPEEGEQAVATLLAAEPALRRVPIAAAEVAGLSEILNPEGDL
RTLPCHLPNADPKLGGLDGFFAARLVKS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgccatctcaacgttttgctcctccgcccgaagtgccaggccttgcggcacgacggatt
gccgccgacatcgtcgacggcgtgctgcacaagcgccgcacgcttgacgaccagctcgac
ggcagcggtgcccatcccggactgaagtcgctggccgaccgcgaccgggcgttgatgcgg
cgcctggtcgccaccgtgctgcgccggctcggcacgctcggccacgtgctgtcgcgcctg
ctcgacaagggcattccttccgacgcgccgcgcgcgcagagcgcgctgctgatcggcgcg
gcgcagatcctctggatggacgtgccggatcacgccgccgtcgacctctccgttcgcctg
gtgcaatccgaccggcgcgccgcgcgctatgccggcctcatcaatgccgtgctgcgccgc
tgcgcacgcgagggcaaggcgctggtcgaggaggtcgccacgcaatcgctcgaccttccg
ccatggctgctcgcgcgctggagcgcacattatggcgaagccaccgcaagagagatggcg
ctggcgctcggccacgagccctcgctcgatctcaccgtgaagtcggatcccgcgcaatgg
gcgagccgcctgcacggcgagatgctgccgaccgggacggtgcggatgctgctgcacggc
tcggtgacgatgctgcccggcttcaccgagggacaatggtgggtgcaggacgccgccgcc
gcgctgccggcccggctgttcggcgacgtcaaaggcaagtccattgcagatctctgcgcc
gcccctggcggcaagaccgcacaactggcgctggcgggcgctcaggtcacggcgatcgac
cgctcgccggcccgggtggcacggctgcgcgagaacctggcgcggctgtcgctccaggcc
gagaccgtcgtcgccgacgccgtggaatgggccggcccggccgagggcttcgacggtgtc
ctgatcgatgcgccctgcacctcgaccggcacgatccgccgccatcccgacgtggcctgg
ctgcggcaggaatccgacatcgcccccctgaccgcgctccagcaacggctgctgcgaaaa
tcggtgtcgctgctcaagccgggcggtacactgatctactgcacctgctcgctggaaccc
gaagaaggcgagcaggccgtggcgacgctgctggcggccgagccggcgcttcgccgcgtc
ccgatcgcggccgcggaggtcgcgggcctcagcgaaatcctcaacccggagggcgatctg
cgcaccctgccctgccatctgccgaacgccgatcccaagctcggcggactcgacggattt
ttcgcggcccggctggttaaatcctga
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