Bdellovibrio sp. ZAP7: DOM22_00020
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Entry
DOM22_00020 CDS
T06441
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bdz
Bdellovibrio sp. ZAP7
Brite
KEGG Orthology (KO) [BR:
bdz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bdz03032
]
DOM22_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
bdz03400
]
DOM22_00020 (gyrB)
Enzymes [BR:
bdz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DOM22_00020 (gyrB)
DNA replication proteins [BR:
bdz03032
]
Prokaryotic type
DNA Topoisomerases
DOM22_00020 (gyrB)
DNA repair and recombination proteins [BR:
bdz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DOM22_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_insert
GyrB_hook
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QDK43665
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Position
3942..6371
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AA seq
809 aa
AA seq
DB search
MSTEEQQQPASYSADSIQVLEGLEAVRKRPGMYIGDTQFKGYHHLVYEIVDNSVDEHLAG
YCKTIKVSINADESITVEDDGRGIPVATQKQTGKSALELVMTVLHAGGKFDGGGYKVSGG
LHGVGASVVNALSTRVSVEVQREGHFWRQNYERGKILAPIEKGEETTKTGTKTTFKPDRD
IFKDETLTYDFATLANRFRELAFLNAGLHISLSDERTGKKQDFQYAEGVAEFVKYMNQSK
KSLHNEVVYFKGEKDEVEVEIAMQWNDSYSESIFTYCNNINTHEGGTHLVGFRAALTRTT
NAYATEKNLLKDLKTNLEGEDIREGLAAVISVKVREPQFEGQTKTKLGNAEVKGIVESLV
NEKLADWMDRNPSVSKNVIMKCVESARAREAARKARDLTRRKTALDGGSLPGKMADCQER
DPALCELYLVEGDSAGGSAKQGRDRRTQAILPLKGKILNVEKARFDKIISSEEIKVIISA
LGTGIGKDNVNVDKIRYHKIIIMTDADVDGSHIMTLLLTFFYRQMPLVLERGYVYIAQPP
LYRAKKGKEETYLKNEAALTEYLLSSGLNNFKIKGKENLPEADLRQLILNIQKLNSLIRV
SSKKYDKDVLYFMLSKVADLEKTLSDEGKLKTVLADMTAWVNADPKLGITEFKAEVKQDE
ATGKPYADIYTVRYADRMTTKFSLDSLRSSEMIELRKIWGQIQGISTLPLTIIEGENEVQ
FESYNEFYEHVMESTKKGIYIQRYKGLGEMNPEQLWETTLNKENRTLLRVSIEDAVAADE
TFSILMGEMVEPRRNFIHENALLARSLDV
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
gtgtctacagaagaacaacagcaaccagcttcctattcagctgattcaattcaagttctt
gaaggtcttgaagcggttcgtaaacgtcccgggatgtatatcggtgatacacaattcaag
ggttatcatcaccttgtgtatgagattgtggataactcggtagacgaacatcttgcggga
tattgcaaaacaatcaaagtatctatcaacgcagatgagtccatcacagtcgaagatgac
ggtcgtggtattcctgttgcgactcaaaaacaaactggtaaatcagctcttgagctagtt
atgaccgtacttcacgccggtggtaaattcgatggcggtggatataaagtttctggcggt
ctacatggcgtgggtgcttccgttgtaaatgccctttccactcgcgtaagcgttgaagtt
caacgtgaaggtcacttctggagacaaaactacgagcgtggcaaaatcttagcgccaatt
gaaaaaggcgaagagactacaaaaactggaacaaaaacaactttcaaaccagatcgtgat
attttcaaagacgaaactttgacttacgattttgcgactcttgcaaatcgtttccgtgaa
cttgctttcctaaatgcaggtcttcatatttctttatctgacgaacgcacaggtaagaaa
caagatttccaatacgctgaaggtgttgcggaattcgtcaagtacatgaatcagtctaaa
aaatctcttcataacgaagtggtttacttcaaaggcgaaaaagacgaagtcgaagttgag
atcgcaatgcagtggaatgattcatattcagaatctattttcacatattgcaataacatc
aacacacatgaaggtggtactcaccttgttggtttccgtgcagcgctaactcgtacaacg
aatgcatatgcgactgaaaaaaatcttttaaaagatctaaaaacaaatcttgagggtgaa
gacatccgtgaaggtttggcagcagttatctctgtaaaagttcgcgaaccgcaattcgaa
ggacaaacaaaaactaaacttggtaatgccgaagtaaaaggtatcgtcgagtctttggtg
aatgagaaacttgctgactggatggatcgcaatccgtccgtttctaaaaacgttatcatg
aaatgcgtggaatcagcgcgtgctcgtgaggcggctcgtaaagctcgtgatttgactcgt
cgtaagacagcgttggatggtggttcattgccaggtaaaatggcggactgccaggaacgt
gatccagctctttgcgaactgtacctggtggaaggggactccgcgggaggctccgcgaag
caaggtcgcgatcgtcgtacacaagcgattttgccgttaaaaggtaaaatcctaaacgta
gaaaaagcgcgctttgataaaattatttcttctgaagagatcaaagttattatctcggca
ctaggtactggtatcggtaaagataacgtgaatgttgataaaatccgttatcacaaaatc
attatcatgaccgatgccgacgtcgacggttctcatatcatgactctgcttttaacgttc
ttctatcgtcaaatgccattggtacttgagcgcggttatgtgtatatcgcacaaccacct
ttgtaccgtgctaaaaaaggtaaagaagaaacatacttaaaaaatgaagctgctttgact
gagtatcttttgagctcgggtcttaacaacttcaaaatcaaaggcaaagaaaacttgcct
gaagcagatcttcgtcagttgatcttaaacatccagaaactaaacagtttgatccgtgtc
tcttccaagaaatacgacaaagacgttttatatttcatgttaagcaaagtggctgatctt
gaaaaaacattgagtgatgaaggcaagttgaaaaccgttcttgctgacatgacggcttgg
gtgaatgcggatccaaaacttggaatcacagaattcaaagcggaagtaaaacaagatgaa
gccactgggaagccatacgcagacatctatactgttcgctatgcagaccgcatgacaaca
aagttcagtctggacagcttgcgctcttcagaaatgatcgagcttcgtaaaatctggggt
caaatccaaggtatcagtacacttccacttacgatcattgagggcgaaaacgaagtgcaa
ttcgaaagctacaatgagttctatgaacacgttatggaatctacgaaaaaaggaatctac
atccaacgttataaaggattgggagagatgaatccggagcagttgtgggaaactacactg
aacaaggaaaacagaactcttctaagagtttctattgaagacgctgttgcggctgatgaa
acattctctatcttgatgggtgaaatggttgagcctcgtcgtaactttatccacgaaaat
gctctactggctcgtagccttgacgtttaa
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