Bdellovibrio sp. ZAP7: DOM22_03455
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Entry
DOM22_03455 CDS
T06441
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bdz
Bdellovibrio sp. ZAP7
Brite
KEGG Orthology (KO) [BR:
bdz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdz03400
]
DOM22_03455
Enzymes [BR:
bdz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DOM22_03455
DNA repair and recombination proteins [BR:
bdz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
DOM22_03455
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Cas_Cas4
Motif
Other DBs
NCBI-ProteinID:
QDK44276
UniProt:
A0A514XF13
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Position
688914..691643
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AA seq
909 aa
AA seq
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MLQIVPIENRSQINELFAKYNPREQSWLVSDLRTKFELQQKILARDGQYVDESVLRASDL
WKLLLKRLEPRLRLVSNPFARSILRTILDENAEALGVNSSAEDTVFSYIDQLAAIIFHPE
GTQKLNDWFDEHPEAKNRWGAWYLRARFCAIQLLEKYNIITAGWITSYLQNFNDLERVWD
IPLIVDLSGEISRVEAEILRTLSRTIDVVVLEPTPTWRDEFKYLLRPYEDLRGQSSSIKK
LQPAAPVTKTKEVLRFSGMLAEIKNSVGQVRKWLEAGIPADNIAVIAPDIEQYWPVLQAF
LKEEGIPVQKDITHKIQSLPSATRWLATLRAKSGRLSSSDLEISFFEKHESQALRYEDFK
ALFKSLYVNEDLARNELIHKIYFEQIDLSGPVVRDEFVGKALSFWSSSDTEVVQIVLREL
LQNATANTKLIWKEWLSYLESIVAAKEYSLEKGESSGVLVTKLMSAYSEKARYRIFVGLT
DESLKSRNKTQLSGSDYFDLAKDIGFYLDNPDQSDLAFELRLLAEADSVHDIYCFGGTDL
SGTLCSPSTFWMSLNEGHAHETLTVPMETRWDEIQYSKQGANRTWIDSRKAEIEHKIQLD
LGKADLPLVELKKLPSISASAIESYLECPFIFAAQRYFKLKDLPEVDLDVDHRTRGQLAH
ALFEKLTQEPMRFDWQSAEIEEILESVRKDKNMLFADERLWLPLRKKHVQLAQRFLDFEK
TWRQEYNLTKTLAREKRFEFYLDPKSETLSKEASDGAFRISGSIDRVDTDQDGHLVLLDY
KSSAGGISAHGSWLKNHELQLLFYMWVIEKSLMEEMKGEVIGLFYYIFRTFDRKGFRVND
KAGRLYPATRTKDKNATLEAKELYLTEFSKILLATLERIRLGEIRPAPVDTQICTSCEWR
RQCRAPHLN
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgctacaaattgtcccaatcgaaaatcgctcgcagatcaacgagctatttgccaaatac
aatccacgagaacagtcgtggctggtttcggatttgcgcaccaaattcgaattgcagcaa
aaaatcttagctcgtgacggccagtacgtggacgaatcggttctgcgtgccagcgatttg
tggaagctgttgttaaaacgtctggagccgcgcctgcgtttggtgagtaatcccttcgcg
cgttccatcttacgtacaattttggatgaaaacgccgaagccttgggagtgaactcttcc
gcggaagacacggtcttttcgtatattgatcaattagcagcaatcattttccatcccgag
ggaacgcaaaagctcaacgattggttcgatgaacatcctgaagccaaaaatcgttggggc
gcctggtatctgcgtgcccgtttctgcgcgattcagcttttagaaaaatacaacatcatc
acggcgggttggatcacgtcttatcttcaaaatttcaatgaccttgaaagagtttgggat
attccattgatcgtggatttaagtggcgagatctcccgcgtcgaggccgagattctaaga
actctgtcgcgcaccattgacgttgtggtgttggaaccaacgccaacatggcgtgatgaa
tttaaatacctgttgcgaccctatgaagatttgcgtgggcaaagttcgtccattaaaaag
cttcagcctgcggctcccgtaactaagaccaaagaagttctgcgcttctcggggatgctg
gctgaaatcaaaaattctgtgggccaggttcgtaaatggctcgaggcggggattcctgct
gacaacattgcagtgattgctcctgatatcgagcaatactggcccgtgctgcaagctttc
ctcaaagaagaaggcattcctgttcaaaaagatattactcacaaaatccaaagtttgcct
tcggcgactcgctggctggcaacgttgcgtgcaaagagtgggcgcctgtcctcatcagat
ttggaaatctcgttttttgaaaaacatgaatcccaagcgcttcgctacgaagacttcaaa
gctttatttaaaagtctgtacgtgaatgaggatctggcccgtaatgaactgatacataaa
atttatttcgagcagattgatttaagcggccctgtggtacgcgatgaatttgttgggaag
gccttaagtttttggagttcctctgatacggaagtcgtgcaaatcgtgttgcgcgaactt
ttgcagaatgcgacggccaataccaaattgatctggaaagaatggcttagctatcttgaa
agtatcgtcgcggccaaagaatacagtctggaaaaaggcgagagttctggtgttctggtc
acaaagctgatgtctgcgtacagcgaaaaagcccgctatcgtatattcgtgggactgaca
gatgagtctttgaagtctcgcaataaaactcagctgtcgggctctgattattttgatctt
gccaaagatatcggtttttatctggataatcccgatcaaagcgatttggcttttgagttg
agacttttagcggaagctgattctgtccacgacatctattgtttcgggggaacagacctt
tcaggcactctttgttcaccatccactttttggatgagtttaaatgaaggtcatgcccac
gaaacgctgactgttcctatggaaactcgctgggatgaaattcagtattccaagcagggt
gcaaacagaacttggatcgatagtcgtaaagccgaaatcgagcacaaaattcaactggat
cttggaaaagcagatttgcctttagtggaacttaagaagctcccaagcatttctgcctct
gcgattgaaagctatttggaatgtccgtttattttcgcggcccaaagatactttaagctt
aaagatctgcccgaggtggatctggatgtggatcaccgcactcgcgggcagttagcccat
gccttgtttgaaaaactcactcaagaacccatgcgctttgattggcaatccgctgagatc
gaagaaattttggaatccgtccgcaaagacaaaaacatgctgtttgcagacgagcggttg
tggctgcctctacgtaaaaagcatgtgcagttagcacaaagattcctggattttgaaaaa
acttggcgccaggaatataacctgaccaaaactctggcgcgagaaaagcgttttgaattt
tacctggatccaaaaagtgaaaccctcagtaaagaggcaagcgatggtgcttttcgtatc
tcgggttccattgaccgtgtggatactgaccaagacggccacttggtattgctggattat
aaaagctccgccggcggtatttcagcccacggttcatggcttaaaaaccatgaactgcaa
cttttgttttacatgtgggtgattgaaaaatccctgatggaggaaatgaagggcgaagtc
attggcttgttttattatattttccgtacttttgatcgcaaaggtttccgcgtaaacgac
aaagcgggccgtttgtatcctgcgactcgcaccaaagacaaaaatgccactttggaagcg
aaggaactttacctaacagagttctcgaaaattttgctggcaaccttggaacgtattcgt
ctgggcgagattcgtcccgcaccggtagatacgcaaatttgtacctcgtgtgaatggaga
agacagtgtcgagcaccgcacctcaattaa
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