Bdellovibrio sp. ZAP7: DOM22_03530
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Entry
DOM22_03530 CDS
T06441
Name
(GenBank) HD family phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
bdz
Bdellovibrio sp. ZAP7
Brite
KEGG Orthology (KO) [BR:
bdz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdz03019
]
DOM22_03530
Messenger RNA biogenesis [BR:
bdz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DOM22_03530
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
DMPK_coil
Motif
Other DBs
NCBI-ProteinID:
QDK44290
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All DBs
Position
709876..710838
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AA seq
320 aa
AA seq
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MEKKTVQSLQDKDAVDSLFLVKEKNVGVGKNGRAFMGLQLGDATGTIDARLWDRVEELSR
LFETGDVLKVKGQVQLFQNRKQLVIHKLERVENSEVNFEDFIPKSSKNSEDMMAELIQLV
RSMRNDHLRQLVLDTLEDPEIRPRVLRAPAAKSIHHAWVGGLLEHILSICKIMDFMGSHY
PFLNRDLLLFGAIFHDIGKIWELSYDNGVSYTDRGRLLGHMQIACELIDKKSARILGFSE
ELRDICKHIILSHHGKLEYGSPKRPKFMEAMLIAMVDDLDSKVATLKTIVDGERGSGEKW
SRYNELFDRYFLLDDLNEKY
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaagacggttcaaagtctacaggacaaagacgcagttgattctttattcctg
gttaaggaaaaaaacgtcggcgttggtaaaaacggccgggcttttatgggcctgcagttg
ggcgatgccacaggaactatcgatgcgcgcctttgggatcgcgttgaagagttatcccgt
ttgtttgaaacaggggatgtccttaaagttaaggggcaggttcaattattccagaaccgt
aaacagctggttatccataaacttgaacgcgttgaaaattctgaagtgaactttgaagac
ttcattccaaagtcttcaaaaaattctgaagacatgatggccgagctgattcagcttgtg
cgcagcatgcgtaatgatcatttaagacaattggtattggacaccttagaagatcctgag
attcgtcctcgcgttttacgtgcacccgcagctaaatccatccaccatgcgtgggtgggt
ggattgcttgaacacatcctttcgatctgtaaaattatggactttatgggctctcactat
ccgttcttgaatcgtgacttgcttcttttcggagcaatctttcacgacatcggaaaaatt
tgggagctttcctacgataatggcgtttcctataccgatcgcggccgtctgttaggacac
atgcaaatcgcttgtgaacttatagataaaaaatcggctcgtatcctcggcttcagcgaa
gagctccgcgatatttgtaaacatataatcttgagtcatcatggtaaactggagtacggt
tctcccaagcgtccaaaatttatggaagcaatgttgattgcgatggttgatgatcttgat
agcaaggtcgcaacattgaaaacaatcgtggatggagaacgcggttcgggcgagaaatgg
tctcgatataatgaactgtttgaccgttacttcctccttgatgatttgaatgagaagtat
tga
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