Bdellovibrio sp. ZAP7: DOM22_07590
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Entry
DOM22_07590 CDS
T06441
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bdz
Bdellovibrio sp. ZAP7
Pathway
bdz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bdz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DOM22_07590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdz03019
]
DOM22_07590
03009 Ribosome biogenesis [BR:
bdz03009
]
DOM22_07590
Enzymes [BR:
bdz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DOM22_07590
Messenger RNA biogenesis [BR:
bdz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DOM22_07590
Ribosome biogenesis [BR:
bdz03009
]
Prokaryotic type
rRNA helicases
DOM22_07590
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
CMS1
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
QDK47414
UniProt:
A0A514XPZ7
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All DBs
Position
complement(1534175..1536034)
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AA seq
619 aa
AA seq
DB search
MDAMKDMGFSTPTPIQKQAIPLLLGGANDFIGLASTGTGKTAAFGIPLIENLDATIKDTQ
ALVLSPTRELALQVAEQLALLGKKKGIRVVTIYGGASYRTQIDGIKRGAHIVVATPGRLV
DFLEQKMLKLSKVQTVILDEADEMLSMGFKDALDFILSATHPDDAASSDRAACRTWLFSA
TMSTEVRRITEKYLENPETVAVNKVGSTADTIEQVYYTVKNMHKTEVISRLLQTLPEFYG
IIFCQTKMEVAELSDILAQRGFPTDSLHGDKSQQEREATLRKFKSKQVKVIVATDVAARG
LDIKDLTHVVNYNLPWDAESYVHRIGRTGRNGQKGTAITLVNSDQLTLLRRIMNTTKATF
TKGVVPSADEVAGLKIKNVLDKVGAMKEDDASLLLAADLIQDLVQADDINFKDLSKEDLL
ARFIVAYFPDVFVKKDLILDYMGDRIPRELLPRDPNNNRFTSGRDGGGDRGGYRDRPRTG
GGYRGDRGGFRSNRRDDGDRPRFNDGGYQNDGPSSRGASAPRRAPGGASSAFRGNDAGGE
QRAERSSSARTERYDREEGRGNRAPAGDNGGGERSFRKRSFGSDDNRGARSERSERADHP
GIKRSRPGGGSSAPRRFRD
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgatgaaagacatgggcttctcaactccgacgcccattcaaaaacaagctatt
cctttgctattaggcggtgcgaacgatttcatcggtctcgcttctacagggactggtaaa
actgctgcgttcggtattcctcttatcgaaaatctagatgcgacaatcaaagacactcaa
gctcttgttctttctccaactcgtgagttggcgttgcaagtggctgagcaattggctttg
cttggtaagaaaaaaggcatccgcgtagtaacaatctacggtggtgcttcttaccgcaca
caaatcgacggcatcaaacgtggcgcccacattgtggtagcgacaccgggccgcttggtg
gatttccttgaacaaaaaatgttaaaactttccaaagttcaaactgtgatcctggacgaa
gcagacgaaatgctttctatgggtttcaaagacgctttggacttcatcttgtcagcaacc
cacccagacgacgctgcttccagtgatcgcgcagcttgcagaacttggttgttctcagca
actatgtcgactgaagttcgtcgtatcactgaaaagtacttggaaaacccagagacagtg
gccgtgaacaaagtgggctctactgctgacactatcgagcaagtttactacacagttaag
aacatgcacaaaacagaggttatctctcgcttgttgcaaactttgcctgaattctacggt
atcatcttctgccagactaaaatggaagttgctgagctttctgacatcttggctcaacgt
ggcttcccaacagactctttgcacggtgataaatctcaacaggagcgtgaagcaactttg
agaaaattcaaatccaaacaagttaaagttatcgtagcaactgacgttgcggcacgtggt
ttggatatcaaagatttgactcacgttgtgaactacaacttgccatgggatgcagaatct
tatgttcaccgtatcggccgtacgggtcgtaacggtcaaaaagggactgctatcactttg
gtgaactctgatcaattgactcttcttcgtcgtatcatgaacacgacgaaagcgactttc
actaaaggtgttgtgccttctgctgatgaagttgcgggtcttaaaatcaaaaacgtattg
gataaagtgggcgcgatgaaagaggacgacgcttctcttcttttggctgctgatttgatc
caagacttggttcaagctgacgacatcaatttcaaagatctttctaaagaagacctcctt
gcacgctttatcgtggcgtacttcccagatgtattcgttaaaaaagatttgatcttggat
tacatgggcgaccgtatccctcgtgaattgttgcctcgtgatccgaacaacaaccgcttc
acttctggccgtgatggtggtggtgatcgtggtggttaccgtgaccgtcctcgtacgggt
ggtggttaccgcggtgaccgtggtggtttccgtagcaaccgtcgtgatgatggcgatcgt
cctcgtttcaacgatggtggttaccaaaatgatggaccaagcagcagaggtgctagtgct
cctcgccgtgcaccagggggcgcaagcagcgcattccgtggtaacgatgcaggtggcgaa
caacgtgctgagcgcagctcaagtgcacgtactgagcgttatgaccgtgaagaaggccgt
ggcaaccgtgcacctgctggtgacaatggtggtggcgagcgttctttccgcaaacgttcc
ttcggcagcgacgacaaccgtggtgctcgttctgagcgttctgagcgcgcggatcaccca
gggatcaaaagatctcgcccaggtggcggttcttcagctccccgtcgtttccgcgattaa
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