Bdellovibrio sp. ZAP7: DOM22_08235
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Entry
DOM22_08235 CDS
T06441
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bdz
Bdellovibrio sp. ZAP7
Brite
KEGG Orthology (KO) [BR:
bdz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bdz03016
]
DOM22_08235 (truB)
Enzymes [BR:
bdz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DOM22_08235 (truB)
Transfer RNA biogenesis [BR:
bdz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DOM22_08235 (truB)
Prokaryotic type
DOM22_08235 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Gasdermin
UfSP_MPN_N
DKCLD
TraE
Motif
Other DBs
NCBI-ProteinID:
QDK45144
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All DBs
Position
1671227..1672186
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AA seq
319 aa
AA seq
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MTNNSENLKTPPAKRISVDFNGLLLVDKPSGISSHDVVSRLRRIMGTKSVGHSGTLDPMA
SGLMACLINEATKLSQYILEGDKGYRVRIQFGIRTDTLDTTGETLETKPVSLVQETLLSE
AMKLQGEMEVEVPIYSAIKVQGKKLYEYARQDKDVVIPKKVMNFWDVQFLGMGEDWAEFD
LRCSKGSYIRTWVDLLGQALGCGAAMSALRRTYSAPYHLQQGQTLEAIEECVKKSTFSSA
FVAMDAALPMVKRIRVKGQDQVLLGNGQISHDLRSQLIAVFKPEEDQYVQILALEGGKLL
AIVGLEPGRGFVLKRVFKY
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgacgaataattctgaaaatttaaaaacgcctccggctaaacggatcagcgtcgatttc
aacggcttattgttagttgataagccttctggcatttcgagccatgacgtggtttcacgc
ttgcgccgtattatgggcacgaagtctgtcggtcactccggcacgttggatccaatggcg
tccggcttaatggcctgcctgatcaatgaagcgaccaagctttctcaatacattctggaa
ggtgacaagggctaccgtgtgcgcattcaatttggaattcgcacagataccctggatacc
accggagaaactttggaaaccaagcccgtcagtctggtgcaggaaacattgctctctgaa
gccatgaaactgcagggtgagatggaagtggaagttccgatttactcggccatcaaagtt
cagggtaaaaaactttacgaatatgcccgccaggacaaagacgtcgtaatccctaaaaag
gtcatgaacttctgggatgtacagtttctgggaatgggtgaggattgggccgagtttgat
cttcgctgttctaaaggcagctacattcgtacttgggtggaccttttggggcaggctctt
ggctgtggtgcggcgatgagtgccttgcgcaggacatattcggctccctatcatttgcag
caggggcagaccctggaagcgattgaggagtgtgtaaaaaagagcactttttcgagcgct
tttgttgcgatggatgccgctttgccgatggtgaagcgtatccgcgtgaaggggcaggat
caggtgcttttggggaatggccaaatcagccatgacctgcgtagccagcttatagctgtt
tttaagcccgaagaagaccaatacgtgcagattcttgccctggagggcgggaagcttttg
gccattgttggcctcgagccggggcgaggatttgtcctgaagcgcgtatttaaatactaa
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