KEGG   Bdellovibrio sp. ZAP7: DOM22_09250
Entry
DOM22_09250       CDS       T06441                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
bdz  Bdellovibrio sp. ZAP7
Pathway
bdz00521  Streptomycin biosynthesis
bdz00523  Polyketide sugar unit biosynthesis
bdz00525  Acarbose and validamycin biosynthesis
bdz00541  Biosynthesis of various nucleotide sugars
bdz01100  Metabolic pathways
bdz01110  Biosynthesis of secondary metabolites
bdz01250  Biosynthesis of nucleotide sugars
Module
bdz_M01025  dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:bdz00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    DOM22_09250 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    DOM22_09250 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    DOM22_09250 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    DOM22_09250 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    DOM22_09250 (rfbB)
Enzymes [BR:bdz01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     DOM22_09250 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase 3Beta_HSD RmlD_sub_bind Polysacc_synt_2 NAD_binding_4 adh_short
Other DBs
NCBI-ProteinID: QDK45324
LinkDB
Position
1892157..1893221
AA seq 354 aa
MIFVTGGAGFIGSNFILNWIKKHNEPVVNIDKLTYAGNLENLKEVQDNPNYIFAKVDLLD
LNALEKLVKEHKPRAILNFAAESHVDRSIHGPGEFIQTNIVGTFNLLQVAKEYWSQLQGS
DKEKFRFLHVSTDEVYGSLELKDPAFSETTPYAPNSPYSASKAASDHLVRAYHHTYGLPT
VTTNCSNNYGPYQFPEKLIPLVIHNALNGKNLPIYGDGSNIRDWLYVVDHCEAIELALEK
GRLGETYNVGGWNEKKNIEVVDTICKTLDQVRPRSDGKSYLTQKVFVTDRPGHDKRYAID
ATKIEKELGWKPKENFETGLDKTIRWYLSNETWVSNIVSGSYREWLDKNYGGRQ
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgatttttgttacgggcggcgcgggcttcattggttcgaattttattctaaactggatc
aagaaacataacgaacctgtcgttaatattgataaattaacttatgcggggaacttggaa
aaccttaaagaggttcaagacaatcccaactacattttcgccaaagtcgatcttttggat
ctgaatgctttggaaaaattagtgaaagaacacaagcctcgcgcgattttaaatttcgcg
gcagaaagccacgtggaccgttcgattcatggtcctggtgaattcattcagacaaatatc
gttggcacattcaatcttctgcaagtggcaaaggaatactggtcacaacttcaaggcagc
gacaaagagaaattccgtttcttgcatgtttcaactgatgaagtttacggaagccttgag
ttgaaggatcctgccttcagcgaaacgactccttatgctccgaacagtccgtattctgct
tctaaagccgcgagtgatcacttggtgcgtgcgtatcatcatacgtacggtcttccgacg
gtgacgacaaactgctcgaataactatgggccatatcaattcccagaaaagctgatccct
ctcgtaattcacaatgctttgaatggtaaaaacttaccgatctatggtgatggctcaaac
atccgtgattggttgtatgtggttgatcactgtgaggccatcgaacttgctttggaaaaa
ggtcgcttgggtgagacttacaatgtcggtggctggaacgaaaaaaagaacatcgaagtt
gtcgacactatctgcaaaacgttggatcaagttcgccctcgcagcgatggtaagagctat
ttgactcagaaggtattcgttaccgatcgcccaggccatgacaagcgctatgcgatcgat
gcaacaaaaattgaaaaagaattgggctggaaaccgaaagagaatttcgaaacaggtctt
gataaaactattcgctggtatttaagcaacgagacttgggtttctaatattgtttcaggt
agctaccgtgagtggttggataaaaactatggaggacgtcaataa

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