Bdellovibrio sp. ZAP7: DOM22_12430
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Entry
DOM22_12430 CDS
T06441
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bdz
Bdellovibrio sp. ZAP7
Pathway
bdz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bdz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DOM22_12430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdz03400
]
DOM22_12430
DNA repair and recombination proteins [BR:
bdz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DOM22_12430
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DOM22_12430
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
UB2H
DUF8810
Motif
Other DBs
NCBI-ProteinID:
QDK45899
LinkDB
All DBs
Position
complement(2527858..2529936)
Genome browser
AA seq
692 aa
AA seq
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MAKAYKKNFQLVSEFKPSGDQPKAIEQMVENIAAGLKHQTLLGVTGSGKTFSMAHTIARL
NQPALVLAPNKTLAAQLYAEFKELFPQNAVEYFVSYYDYYQPEAYIPSTDTYIEKDSAIN
EQIDRMRHSATRSLFDRRDVIIVSSVSCIYGLGSPEAYEGMMIQVVSNTEMKRDHLLREL
IRVQYQRNNVDFTRGTVRVRGDNVEIFPPYEEDRAIRVEFFGDFIERLSWIDPLTGQVLE
EIDQIGIYPGSHYATGDDNLKRAIKTIQDELRDRLQYLNQNMKFLEAQRLEQRTYYDIEM
MEQMGFCQGIENYSRHLTGRGEGEPPPTLLEYFPKDFITFIDESHVTVPQIGGMYRGDRA
RKSTLVEHGFRMPSALDNRPLNFQEFEKMMDKVVYVSATPGNYELQKSEGIIVEQIIRPT
GLIDPVVEVRPVKHQVDDLLKEIRERIKLKERVLITTLTKRSAEDLTEYYENLGIKIKYL
HSDIDTIERSEILRDLRLGVFDVLVGINLLREGLDIPEVSLVGITDADKEGFLRSERSLI
QTIGRAARNLNGRVILYGDVITDSMKKAIGETERRRRIQQEHNEAHGITPQSIRKKIRDG
LGETFDGSVGGQPLKGENRQEAIVNKYSHAPDKLTQEIDKLRDKMRKLSKNLDFEEAAKV
RDEIKRLQIVELGIRSGEVEGDSAKVNKDGLE
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagcttataaaaagaactttcaactggtgtccgaattcaaaccttctggtgat
cagcccaaagcgatcgagcagatggtggaaaatattgctgcaggtttaaaacaccaaact
ctgttaggtgtgaccggctcggggaaaacattcagtatggcacataccattgcccgactg
aatcaacctgcattggtattggctcccaataaaacattggcggctcagctgtatgcagag
tttaaggagctgttcccccaaaatgcggtggaatacttcgtcagttactacgactactac
cagccggaagcctatattccgtcgaccgacacctatatcgaaaaagactctgcgattaac
gagcaaattgatcgcatgcgccactcggcgacgcgttctttgtttgatcgtcgcgacgtg
atcatcgtcagttccgtatcctgtatctatggtttgggatctcccgaagcctacgaaggt
atgatgattcaggtggtttcgaacacggaaatgaagcgcgatcatcttttacgtgaacta
atccgtgtacaatatcagcgcaataacgtcgacttcactcgcggaacagtgcgtgtgcgt
ggcgataatgtcgaaattttcccaccctacgaggaagaccgtgcgatccgcgtggaattc
tttggcgactttatcgaaagactttcttggattgatcctttgacaggacaagttctggaa
gagatcgatcaaattggcatctatcccggaagtcactatgcgaccggtgatgacaatcta
aaacgcgccatcaagactattcaagatgagttgcgcgatcgcttgcagtacttaaatcaa
aatatgaaattcctggaggctcagcgcctcgaacaaagaacctattacgacatcgagatg
atggaacaaatgggtttctgtcaggggattgaaaactactcccggcacttaacgggccgt
ggagagggcgagccgcctccaactttgctggaatatttccccaaagacttcatcaccttt
atcgatgaatcccacgtcaccgtgccacaaatcggcggtatgtatcgtggagaccgcgca
cgtaagtccacgctggtagagcacggtttccgtatgccttcagctttggataacagacct
ttgaatttccaagagtttgaaaagatgatggataaagtcgtctatgtgtctgcgacaccg
ggaaattatgaattgcaaaaatccgaagggatcatcgttgagcagatcattcgtccgacc
ggattgattgatcctgtggtggaagtgcgcccggtaaaacatcaagtcgatgatttgctg
aaagaaatccgtgagcgcatcaaactcaaagaacgtgtgctgatcaccacgctgacgaaa
cggtctgccgaagatttgaccgagtactatgaaaacttgggaatcaagatcaagtacttg
cacagtgacatcgatacgatcgagcgttctgaaatcctgcgcgatttgcgtctgggggtt
ttcgacgttctggtcggaatcaatcttttaagagaaggattggatattccagaggtgagt
ctggtcggtatcaccgatgccgacaaagagggcttccttcgttccgagcgatcgttgatt
caaacaattggtcgcgcggcccgtaacttgaatgggcgcgtgattttgtatggtgacgtg
attaccgacagtatgaaaaaagcgatcggggaaaccgagcgtcgtcgtcgcattcaacag
gaacacaacgaagcgcacgggattacgccacaatccattcgcaaaaaaatccgtgacggt
ttgggcgaaacatttgatggatctgtgggcggacaaccgctgaagggcgagaatcgccag
gaagcgattgtgaataagtactcccacgctccagacaagctgacccaggaaatcgataag
cttcgagataaaatgcgcaagctttctaaaaatcttgatttcgaagaagctgcgaaagtg
cgggatgaaatcaaacgtttgcagatcgttgagctggggattcgcagtggtgaagttgag
ggcgatagtgccaaggtgaataaagatggcctcgagtaa
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