Bdellovibrio sp. ZAP7: DOM22_17030
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Entry
DOM22_17030 CDS
T06441
Name
(GenBank) ATP-dependent helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bdz
Bdellovibrio sp. ZAP7
Pathway
bdz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bdz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DOM22_17030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdz03019
]
DOM22_17030
Enzymes [BR:
bdz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DOM22_17030
Messenger RNA biogenesis [BR:
bdz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DOM22_17030
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Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
ERCC3_RAD25_C
Utp25_C
Cas3-like_C_2
HEM4
Motif
Other DBs
NCBI-ProteinID:
QDK46737
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All DBs
Position
3517150..3518544
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AA seq
464 aa
AA seq
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MTSQTFSALPLIEPIQRAVAESGYTVPTPIQQQAIPYLLEGRDLLGCAQTGTGKTAAFAL
PILNHLASQWHRAEPKQARVLVLAPTRELAIQIHESFQTYGKHLKIRTAVIFGGVGQTPQ
VAALKAGVDVLIATPGRLLDLIQQKHLQLGRLEVFVLDEADRMLDMGFLPDIRKVLNYLP
AKRQNLFFSATMPKEIQKLADSLLVNPAKVEVAPVSSTAEMIEQSVMFVDKSKKKDLLRH
LLQDKSFDKVIVFTRTKHGANRVAEGLTKNHIASEAIHGNKSQNARQRALENLREGKIRV
LVATDIAARGIDIDEISHVINYELPNESESYVHRIGRTARAGSQGVAIAFCDAEERAYLK
DIERLIGKSIPVITEQPYHSEEVAGSKILSKGKAKAMIEAMENLKPTRNGLKKRRRLNPR
KKPPTFEAKGGSGGHKPGGHKPHAHKGGSHPAKGGGHHGGGHKK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgacttctcaaacattctctgctcttcccctgatcgaacctatccaacgtgctgtcgct
gaatctggctacacggtgccgactccgattcaacaacaagccattccttatttattggaa
ggtcgcgaccttttgggttgcgctcaaacaggtactggcaaaactgcagcattcgctctt
ccaattttaaatcatctggcaagccaatggcatcgagccgaaccgaagcaagcccgcgtt
ctggttttggcaccgactcgtgagcttgcaatccaaattcatgaaagtttccaaacttac
ggtaagcatctgaaaatccgcacggctgtgatctttggtggtgtgggacaaactcctcaa
gtagccgctttgaaagcaggcgtggatgttttgattgcgaccccgggtcgcttgcttgat
ttgattcaacaaaaacatttgcaactgggtcgcctggaagtcttcgttctggacgaagcg
gaccgtatgttggatatgggcttcttgcctgatatccgtaaagttttaaactatctgccg
gcaaaacgtcagaacttgtttttctctgcgacgatgcctaaagaaatccagaagcttgcg
gattcattgttggtgaatcctgccaaagttgaagtggctccggtttcttcaaccgcagag
atgatcgaacaatccgttatgttcgtcgataagagcaaaaagaaagatcttctccgtcac
ctgctacaagataaatcctttgataaagtgattgtctttacccgtaccaaacacggtgca
aaccgcgtggcagaaggcttgacgaaaaatcatatcgcttctgaagctatccacgggaat
aaatctcaaaacgcccgccaaagagctttggaaaacttgcgagaaggtaagatccgcgtt
ttagttgccacagacatcgctgcgcgcggaattgatatcgacgaaatttcccacgttatt
aactatgaacttccgaatgaatctgaaagctacgtacacagaattggtcgtacagctcgt
gctggcagccaaggtgtcgcgatcgctttctgtgacgctgaagaaagagcttacctaaaa
gacatcgaacgtctgattggtaaatctatcccagtcatcactgaacagccttaccattct
gaagaagtcgctggcagcaaaatcctttctaaaggaaaagctaaagcgatgatcgaggcg
atggagaatctgaaaccgacacgcaatggtttaaaaaagcgtcgtcgtttgaatccacgt
aaaaaaccacctacgtttgaagctaaaggcggcagcggcggccataagcctggtggtcac
aagcctcatgcgcacaaaggtggctctcatcctgctaaaggtggaggacatcacggcgga
ggacataaaaaatga
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