Bdellovibrio sp. ZAP7: DOM22_17885
Help
Entry
DOM22_17885 CDS
T06441
Name
(GenBank) ATP-dependent helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
bdz
Bdellovibrio sp. ZAP7
Pathway
bdz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bdz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DOM22_17885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdz03019
]
DOM22_17885
Enzymes [BR:
bdz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DOM22_17885
Messenger RNA biogenesis [BR:
bdz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DOM22_17885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
QDK46891
UniProt:
A0A514XM93
LinkDB
All DBs
Position
complement(3696349..3697998)
Genome browser
AA seq
549 aa
AA seq
DB search
MKFSELNLDPALMTAIQKIGYEDCSPIQEQAMPYILDGKDVAGLAQTGTGKTAAFVLPLM
ERILRARPVHGEVTDAEKEIIEKRAFKDWKPQNFILVLVPTRELAEQVQDNIIKFGADSG
LRGFAIYGGTGYDKQKEALKNGVEFIVATPGRLIDLYKEHLVDLKQVRAIVFDEADRMFD
MGFKDDMKFILQRVPRERQFLVFSATLNFDVLNTAYQFGSEPVEINISRDQAKAENVKDQ
IFHVGNAEKPQHLLSLLKLHNPKQAIIFTNFKMNVEKITKFLIDNDVPAMAISSLLTQAQ
RNRVIEQFKAENHLNILVATDVAARGLDIKGVDLVINYELPMDSESYVHRIGRTGRAGTT
GQAFSMVGEKDIESLTRIEDYLKHKVEVGYLENDQLLQEFKPFPDRFEGHYPKSLDGERG
ERGPRREGGRSGGGNRDRGPRREGDRGPRREGGRGPRGENRGGENRPPREERKGASAVKS
EGPNARHAKRPEHGAKTPAHGQQKRGDNRQGQGAHKRHEPRKGASAARRPPAKQTIGKKI
SSFIKKLFS
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
ttgaaattctcagagttaaatttagatcccgccttgatgactgctatccaaaaaattgga
tatgaagattgcagcccgattcaagagcaagctatgccgtatatcttggatggtaaagac
gttgctggcctagcccaaacaggtacaggcaaaacagctgccttcgttcttcctttgatg
gagcgtattttgcgcgctcgcccagttcacggtgaagtgactgacgcagaaaaagaaatc
atcgaaaaacgcgccttcaaagactggaaaccacagaactttattttggttttggttccc
actcgcgaattggcagagcaagttcaagataacattattaagttcggtgctgacagcggc
cttcgtggtttcgcaatttatggtggcactggctatgacaaacaaaaagaagctcttaaa
aacggcgtcgagttcatcgtagcaactccaggccgtttgatcgatttgtacaaagaacat
ttggtggatttgaagcaagttcgcgcgatcgtattcgatgaagcggaccgcatgttcgac
atgggctttaaagacgacatgaagttcattttgcaaagagtgcctcgcgaacgtcagttc
ttggtattctctgcaaccttgaattttgatgttttgaacacggcctaccaatttggttca
gagccggttgaaatcaacatcagccgtgaccaagccaaagctgaaaatgtgaaagaccaa
atcttccacgtgggcaacgctgaaaaacctcagcatcttttgtctttgcttaaattgcac
aatccaaaacaagcgatcatcttcacgaactttaaaatgaacgtggaaaagatcacgaaa
ttcttgattgataacgatgtgccagcaatggcgatctccagtcttttgactcaagctcaa
cgcaatcgcgtgatcgaacagttcaaagcggaaaaccatctgaacattctggtggcgacg
gacgttgctgctcgtggtttggacatcaaaggtgttgacctggttatcaactatgaattg
ccaatggattctgaatcatacgttcaccgtatcggccgtacgggtcgcgcgggtacgaca
ggtcaggctttctccatggtgggcgaaaaagatatcgagtctttgactcgtatcgaagat
tatttgaaacacaaagttgaagtgggctatttggaaaatgatcagctacttcaagagttc
aaaccattcccagatcgtttcgaaggccattatccaaaatcattggatggtgagcgcgga
gagcgtggtcctcgtcgtgagggtggtcgcagtggcggtggaaaccgtgatcgcggtcct
cgtcgtgaaggtgaccgtggcccacgtcgcgaaggcggtcgtggacctcgtggtgaaaac
cgcggtggcgaaaacagacctccacgtgaagagcgcaaaggcgcttcagccgtgaagtct
gaaggacctaatgcaagacacgctaagcgtcctgagcacggtgctaaaactccagctcat
ggccagcaaaaacgcggtgacaaccgccaaggccaaggtgctcacaaacgtcacgagcca
cgcaaaggtgcaagcgctgctcgcagaccaccagcgaagcaaacgatcggtaaaaagatc
tccagcttcatcaaaaagcttttctcttaa
DBGET
integrated database retrieval system
