KEGG   Bdellovibrio sp. ZAP7: DOM22_19660
Entry
DOM22_19660       CDS       T06441                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
bdz  Bdellovibrio sp. ZAP7
Pathway
bdz03030  DNA replication
bdz03430  Mismatch repair
bdz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bdz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DOM22_19660
   03430 Mismatch repair
    DOM22_19660
   03440 Homologous recombination
    DOM22_19660
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bdz03032]
    DOM22_19660
   03400 DNA repair and recombination proteins [BR:bdz03400]
    DOM22_19660
Enzymes [BR:bdz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DOM22_19660
DNA replication proteins [BR:bdz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DOM22_19660
DNA repair and recombination proteins [BR:bdz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DOM22_19660
SSDB
Motif
Pfam: RNase_T Rv2179c-like DEDDh_C RNase_H_2
Other DBs
NCBI-ProteinID: QDK47223
LinkDB
Position
4040994..4041608
AA seq 204 aa
MRFVAFDFETTGTVPGVDQIIEIGAVRFINGEPEAVFATLVDPLRPIAPGASKVNGIYDN
MVKGKPTIDTLLDSLADFCGDDILVAHNAPFDAQFLTADVKKYESKAPRGIVLDSLPIAR
KVFPGLPNYKLGTLVQHLKIPTTDFHRAEEDATYLGHMFTQMLKRISVGGQAPQVANLVA
LTGKPELRFPQIVRQPKQMDFFGV
NT seq 615 nt   +upstreamnt  +downstreamnt
atgagatttgtagcttttgactttgaaacaactggaactgtacctggcgtagaccaaatt
attgaaattggggctgtccgcttcattaacggtgaaccagaggctgtatttgcgactctt
gttgatccacttcgcccgattgctcctggtgcctcaaaagtaaatggtatttacgacaat
atggttaaaggaaaaccaactatcgacacgttgttggactctttggctgacttttgcggt
gatgacatcctggttgcgcacaatgctcctttcgatgctcaattcctgactgcagacgta
aagaaatacgaatcaaaagcgccacgcgggatcgtcttagactccttgccaatcgctcgt
aaagtattcccgggtcttccaaactacaaattggggactttggttcaacacttgaaaatt
ccaacaactgatttccatagagctgaagaagatgcgacttacttaggtcacatgttcact
caaatgctgaaaagaatttctgtgggcggacaagcacctcaagttgctaacttggtggct
ttgactggtaaacctgaattgcgtttcccacaaatcgtgcgccaaccgaaacaaatggat
ttcttcggcgtttaa

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