Bdellovibrio sp. ZAP7: DOM22_19730
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Entry
DOM22_19730 CDS
T06441
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
bdz
Bdellovibrio sp. ZAP7
Brite
KEGG Orthology (KO) [BR:
bdz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdz03019
]
DOM22_19730
03009 Ribosome biogenesis [BR:
bdz03009
]
DOM22_19730
Messenger RNA biogenesis [BR:
bdz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DOM22_19730
Ribosome biogenesis [BR:
bdz03009
]
Prokaryotic type
rRNA processing factors
DOM22_19730
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Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
eIF-1a
DUF5351
Motif
Other DBs
NCBI-ProteinID:
QDK47236
UniProt:
A0A514XND7
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Position
complement(4054801..4056318)
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AA seq
505 aa
AA seq
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MSAEILINVRPQETRVAYVEGGILTDLKIERKTSPTLVGSIHRGTVIRVLPGMQAAFVDI
GLEKAAFLYVGDIREDVDDNFLSSVDREEPLDEGDDDKPHSHQVKTPIQDLLKEGQSILV
QVAKDPLGTKGARLTTHLSLPGRFVVFLPTVRHLGISRRIEDEAERDRLRQLVQKINPSG
GVIVRTAGDGASEEMLKADIEYLDRMSKEIFKHYEKKKTPGALHTELDVELRALRDLMSE
DVTSVWVDDVEVQKKVVKFVSQFMPKYKQNIVLYEERKPLFDLYDIDIEISRSMERKIWL
KSGGYIVIDEAEALVVIDVNTGKFVGKKDLEDTILKTNLEAVRETAHHLRIRNCGGIIII
DFIDMEKESHREKVMEALAEELSKDRARTNIVSMSQLGLVEMTRKRIRPSLIKTLCEPCS
YCDGKGYIKRKSTVANEIFRELERDADMLTNKKTNVVIHCHSEVVDWIYEVEGESLEGIE
KKLGRSVAFKIEPNYHLEQYEIFFV
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgcagaaattctcatcaacgttagacctcaagaaacacgcgtagcctatgttgaa
ggcggtattcttactgatttaaaaattgaacgcaaaacttcaccgacattggtcgggtct
attcaccgcgggacggtgatccgcgtacttccaggaatgcaggcggctttcgtggacatt
ggtcttgagaaagcggctttcttatacgttggcgacatccgcgaagacgtcgacgataat
tttctttccagcgtagaccgcgaagaacctttggatgagggtgacgacgacaagccccac
tctcatcaagttaaaacaccgattcaggatttattaaaagaaggtcaaagtattttggtg
caagtggcgaaagatccgcttggaacaaaaggtgcccgtttaacaacgcacttatcactt
ccaggacgtttcgtggtgttcttgccaactgtaagacacttgggaatttctcgtcgtatc
gaagacgaggccgagcgcgacagacttcgtcagttggtgcaaaaaatcaatccctccggc
ggagttatcgtgcgtactgctggcgatggcgcatccgaagaaatgttgaaagccgacatc
gaatatcttgatcgcatgagcaaagaaatcttcaagcactacgagaaaaagaaaactccg
ggcgctttgcacacggaacttgatgttgagcttcgcgctcttcgcgatttgatgagtgag
gatgttaccagcgtttgggttgacgacgtcgaagttcagaaaaaagttgtgaaattcgtg
tctcagttcatgcctaagtacaaacaaaacatcgtgctttatgaagaaagaaaacctctt
ttcgatttgtacgatatcgacatcgaaatttctcggtcgatggaaagaaaaatctggttg
aagtccggcggatacatcgtgatcgacgaagcggaagctttggttgtgatcgacgtgaat
acgggtaaattcgtaggcaaaaaagacctcgaggacacgattttaaaaacaaacttagaa
gcggttcgcgaaacagcccatcacctgcgtattcgtaattgcggcgggattatcatcatc
gatttcatcgatatggaaaaagaatctcaccgtgaaaaagtgatggaagccttggcagag
gagcttagcaaagaccgcgcgcgcacgaacatcgtatcgatgtcccagttgggattggta
gagatgactcgtaagcgcatccgtccaagcttgattaaaactttgtgtgagccatgctca
tactgcgatggcaaaggctatatcaaacgcaaatctacagttgcgaacgagatcttccgt
gaacttgagcgcgacgctgacatgttgacgaataagaaaacgaacgtcgtaatccattgc
cacagtgaagttgtcgattggatttacgaagttgaaggcgaaagtctagagggaatcgaa
aagaaactcggccgctccgtggccttcaaaatcgagcctaactaccacttagaacaatac
gagatatttttcgtctaa
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