Bdellovibrio sp. ZAP7: DOM22_19930
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Entry
DOM22_19930 CDS
T06441
Name
(GenBank) excinuclease ABC subunit C
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bdz
Bdellovibrio sp. ZAP7
Pathway
bdz03030
DNA replication
bdz03430
Mismatch repair
bdz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DOM22_19930
03430 Mismatch repair
DOM22_19930
03440 Homologous recombination
DOM22_19930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bdz03032
]
DOM22_19930
03400 DNA repair and recombination proteins [BR:
bdz03400
]
DOM22_19930
Enzymes [BR:
bdz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DOM22_19930
DNA replication proteins [BR:
bdz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DOM22_19930
DNA repair and recombination proteins [BR:
bdz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DOM22_19930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
Motif
Other DBs
NCBI-ProteinID:
QDK47274
LinkDB
All DBs
Position
complement(4102274..4103839)
Genome browser
AA seq
521 aa
AA seq
DB search
MPIFFFDLQTTGAKPENGAAILEMAWTSVSGNTEASLIKLPNDEKIPYRIQMITGIYNDD
MDAANPADAVFASLEEKFANHRCVIHFAQFEKPFLSHQYAQFDKEFPFEIICTHEIAKRL
FPNLPTRGIKGLAGYFGYPTQDLKRAAQQTSATQAIWTSLVAELAKIDIETWEQLQEWLQ
VTPKIKKTKYEYPLQKDKRLTLPDQPGVYRMISKWDEILYVGKATSLKDRVNSYFRGQKN
RDSRKLEMLTQVYDLRVTVCGSPLEAALLETDEIKKWDPRYNISLKAGHRNVVFFNREMT
HIDFEQSAEFNIGPFSSSLVFDSIRNLRDCLVNGKFHDNVFYEPIDAALVEEGFKLFCER
NSFTPEIFKSVRNMLALGLWWNRQYDLLDDEEELGDEATEESKEELSADEVDELIELTAV
DIADKIERHIMRAGRTYVRAKALTKILNADISYKPATSEQQDPYHVQVRGGHIVQEAHGG
RIPKISLWNGLNIDTYDRMSVLLMELGKIRTQEGEVEIHYR
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgcccattttcttttttgatctgcagaccacgggagcaaaacccgagaatggcgctgcc
attttggaaatggcttggacatctgttagtggaaacacggaagcaagcctgattaaactt
ccgaatgacgagaagattccatatcgcattcaaatgatcacaggaatttataacgacgat
atggatgcagctaatcctgctgatgctgtatttgcgtccttagaagagaaatttgcgaat
catcgttgcgttattcattttgcgcagtttgaaaaaccatttctgtcgcatcaatacgca
caattcgacaaagagtttcctttcgaaattatttgcacccatgaaattgcgaaaagactt
tttcctaacttgcctactcggggaattaagggtttagccggatactttggttatcccact
caagatttaaaaagagcggcccaacaaacatctgctacccaagccatttggacgagcctg
gtggcagaactcgctaagattgatattgaaacgtgggaacaacttcaagaatggctgcag
gtcactcccaagattaaaaaaaccaagtacgaatacccgctgcaaaaagataaacgcctg
actttgccagatcagcctggcgtctatcgcatgatcagcaagtgggatgagatcttatac
gtcggtaaggcgacttcccttaaagatcgcgtgaatagttatttccgtggtcagaaaaat
cgcgattcgcgcaaactcgaaatgctgacccaggtttatgatttgcgtgtgacggtttgc
ggaagtccgctggaagcagcattgctggaaactgatgaaattaaaaaatgggatcctcgc
tataatatttcattaaaggcaggccatcgcaatgtggtcttctttaatcgcgaaatgacg
cacattgattttgaacaaagtgcagagtttaatatcggtcctttttcaagcagtctcgtg
tttgattcgattcgcaaccttcgtgattgccttgtaaacggtaagtttcatgacaatgtt
ttttacgaacccatcgatgcagcattagtcgaagagggatttaagttgttctgcgagcgc
aattcatttactcctgagatctttaaatcagtccgtaatatgctggcgttgggcctttgg
tggaatcgccaatatgacttgttggatgacgaagaggagcttggagacgaagcgactgaa
gagtctaaagaagaattatcagcagatgaagttgatgagttgatagaacttaccgcggtt
gatatcgcagataagattgaaagacatatcatgcgtgcaggacgcacctatgtccgagct
aaagcgctgactaaaattttgaatgcggatatttcatataagccagcgacgtccgagcag
caagacccttatcatgtgcaggtccgcggcggacacattgtccaggaggcacatggaggc
cgcattccaaagatttcactttggaacggattgaacatcgatacctatgatcgcatgagt
gttcttttgatggagcttggcaaaatccgcacccaagagggcgaagtcgaaattcactat
cgctag
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