Bdellovibrio sp. ZAP7: DOM22_19935
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Entry
DOM22_19935 CDS
T06441
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
bdz
Bdellovibrio sp. ZAP7
Pathway
bdz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bdz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DOM22_19935
09124 Replication and repair
03420 Nucleotide excision repair
DOM22_19935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdz03021
]
DOM22_19935
03036 Chromosome and associated proteins [BR:
bdz03036
]
DOM22_19935
03400 DNA repair and recombination proteins [BR:
bdz03400
]
DOM22_19935
Enzymes [BR:
bdz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
DOM22_19935
Transcription machinery [BR:
bdz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
DOM22_19935
Chromosome and associated proteins [BR:
bdz03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
DOM22_19935
DNA repair and recombination proteins [BR:
bdz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
DOM22_19935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
HBB
ATPase
MEDS
Motif
Other DBs
NCBI-ProteinID:
QDK47275
UniProt:
A0A514XND0
LinkDB
All DBs
Position
complement(4103851..4106268)
Genome browser
AA seq
805 aa
AA seq
DB search
MAKKNLRKIQIDLRQFALPCPRVGSIEAHSGYGQTPRLGQEIHQNIQRKRIREIPGYEAE
KRLSIEFERDQYLFVVSGRADGVVEGASFQVEEIKSAFDVESLEHKLTVDDNHPYVWQLR
TYGYILYKQMGEVPELKMLLVSSRNFKQSEIYFELDIEEYEAWLALRLAELTEETKIREK
LFKKRVAAAEDLKFPFTSPRPGQTELIENIQLGFIEEKSMVIQAPTGLGKTIGVLYPSLK
DSLARGQKVIYVTPKNSQHQVAEEAVEKLQDQGASIRPLTITAKSKMCFKAEPLCNPQYC
EFAKDYYKKLAENDLVNKVTKLRSLSQGKLQELGEQYQVCPFELSLEAIERADVVIADYN
YVFSTRSLLGRLELPLMEPTQKANLVIDEAHNLPARAQDYFSPAISTRDLQNIIPSLGKI
NIRLQKRAQILCEEAIELIETYRGESRTVVIDFDPVFELESRMREFLGEYLEADIEIQTQ
DGVLRLVNMWSDFAQALELQGPEFFQTYQKNRLFGEINETLKVTCCDASRHLNEIYKSFK
NVVAFSATLKPFTYSMKLLGFDEITTKCLEFVSPFPKEHRKILLIPQISTKFKDRPMNAP
KIAQAMEKIMAVKPGNYIALFPSFEFMKDVEGHLRDSSYQRLVQHREMKAARVDDFLSFM
KNADKPTLLLAVQGGIFSEGVDFPGDMLIGAFVVGPALPNFDFEREQIRQYYERSYDKGQ
AFNYTYVYPAMAKTIQSAGRVIRSENDKGIIVLMDSRFLETTYSETMPQGWFEQGAQELV
SGKIISDVTDFWKSIETNSESEIEA
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaagaacttacgcaaaattcaaattgatctgcgccagttcgctttgccatgc
ccaagagtgggcagcattgaggctcactccggttacgggcaaactcctcgcctgggccaa
gagatacatcagaacattcaaagaaaaagaattcgcgagattccaggctacgaagccgag
aaaagactttctatcgaatttgaacgtgatcagtacttgtttgttgtctcgggccgtgca
gatggtgtggttgagggcgcaagctttcaagttgaagaaatcaaatcggctttcgatgtt
gagtcgctggaacacaaacttacagtggatgataatcatccctatgtgtggcagcttcgc
acatacggatacattctttacaagcaaatgggtgaagttccagagcttaaaatgcttttg
gtttcttcgcgaaactttaaacagtccgagatctattttgaattggatattgaagaatac
gaggcctggttagcgctgcgcttggcagaactaacagaagaaactaagatccgcgagaag
ctattcaaaaagcgtgtggcagcagcagaggatttgaagtttccgtttacttcaccacgt
cctgggcagactgaattaattgaaaatatacagttgggattcatcgaggaaaaatcgatg
gtcattcaggcaccgacaggcttgggtaagacgattggtgttttatatccttccctgaag
gactctttggcgcgtggacaaaaggtgatctatgtgacaccaaagaactcccagcatcag
gtggccgaagaagcagttgaaaaactgcaggatcagggcgcatcaatcagacccctgaca
atcacggcgaaaagtaagatgtgttttaaggccgaacctttatgcaatccgcagtactgt
gaatttgctaaggactattacaaaaaactggcagagaatgatctggttaacaaagttacg
aagcttcgctctttgagccagggaaaacttcaagagttgggtgagcagtaccaagtgtgc
ccttttgaattgtctttagaggcgatcgaaagagcagacgtggtcatagctgactataac
tatgttttttcaaccagaagtctattaggacgtttagagcttcctttaatggagcccact
caaaaagcaaatctggtaatcgatgaagctcataatttgccggcacgggcacaagactat
ttttcaccagcgatttcaacgcgggatctgcagaacatcattccgtcgctaggaaaaatc
aatatccgccttcaaaagcgggcgcagatactttgcgaagaagcgatcgagctgattgaa
acctatcgtggtgagtctcgtactgtggttattgattttgatccggtctttgagcttgag
tccagaatgcgtgagtttttgggcgaatatctggaagccgacatcgagattcaaacgcaa
gacggggtcttgcgtctggtgaatatgtggagcgactttgcacaagctctcgaactccag
ggccctgaattttttcagacataccaaaagaatcgtctatttggcgaaatcaacgagacc
ctgaaggtgacttgttgtgatgcctctagacacttaaatgaaatttataaatcatttaaa
aacgttgtcgcattttctgcgacgttaaagccgtttacctattccatgaaacttttgggt
tttgacgagattacgaccaagtgccttgaattcgtttctccatttccgaaagaacatcgc
aagattttgctaattccccaaatctcgacaaagtttaaagatcgtccgatgaacgcgcca
aagattgcccaggctatggaaaagattatggcggtaaagcccggaaactatattgcactc
ttccccagcttcgagttcatgaaggatgttgagggacatctgcgagacagttcctatcaa
agattagttcagcatcgtgaaatgaaagccgcacgggtcgacgacttcctgtcatttatg
aagaatgcagataagccaactttgctattggctgtgcagggtggaatcttttctgaaggc
gtcgattttccgggtgatatgctaattggtgctttcgtggttggacccgcgctgcctaat
tttgattttgagcgcgaacaaattcgccagtattacgagcgttcctatgataaaggccaa
gcattcaattacacctatgtctatcccgccatggcgaagacgattcaatccgcgggccgg
gtgattcgctctgaaaatgacaagggaattatcgtcttgatggattccagatttttagag
acaacgtactccgaaaccatgccccaaggctggtttgagcaaggtgcccaggaattggtc
tcaggaaaaatcatttctgacgtgaccgatttttggaagagcattgaaactaattctgag
agtgaaatcgaagcgtga
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