Bdellovibrio sp. ZAP7: DOM22_20010
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Entry
DOM22_20010 CDS
T06441
Symbol
trmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
bdz
Bdellovibrio sp. ZAP7
Brite
KEGG Orthology (KO) [BR:
bdz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bdz03016
]
DOM22_20010 (trmE)
Transfer RNA biogenesis [BR:
bdz03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
DOM22_20010 (trmE)
Prokaryotic type
Methyltransferases
DOM22_20010 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
GTP_EFTU
RsgA_GTPase
Arf
Ras
Roc
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QDK47289
UniProt:
A0A514XNF6
LinkDB
All DBs
Position
complement(4118947..4120371)
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AA seq
474 aa
AA seq
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MLRGDRDKDTICAVSTPHGVGGISVIRVSGPRTFEIVSKLCKFLPAHPESHKVYFGNLKD
GAREIDEVLVTYFQNGRSFTGEEVIEISCHGSPLICQNILNSLVQLGARPADRGEFTYRA
FMNGKLDLVQAESVLALIESQSQQAAKLALRQLKGQLSSKLEEVEDDMTWILAHAEASID
FSTEGIDVVDYSVVQVRLKKIEATLKDLVGTFKVGRLLKDGFRVVLTGLPNVGKSSLLNL
FLEDERAIVTDIPGTTRDVIHGDTSYEGVKFTFVDTAGLRDEATDLVERIGIQKSYEAQN
ESDVVFFVFDIEKGLGAEETQILESLDPQKTFILANKIDRIGGSKPLEIVEKAIKNSKFF
QKIVDPQAFFTRRVFFVSALDKKVRSSVLQELVQEFADMQVENTVLISNARHYENLVRAL
ENTQRSQTLVDQGMGSEFLALELKESLIAIHETLGKRFDDQIMDRVFKEFCIGK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgaggagatcgtgacaaggatacaatatgcgcggtctccactcctcacggagtg
ggcggtatctccgtcattagagtcagcggccctcgtacttttgaaatcgtatcgaaactt
tgcaaattcttacctgcacatcctgaatctcataaagtctatttcggaaatctgaaagac
ggcgcgagggagattgatgaagttctggtaacttacttccaaaatggtcgctccttcacg
ggtgaagaagtaatcgagatttcctgccacggaagtcctttaatctgccaaaatatttta
aattcactggtgcagttgggtgctcgtcctgcggatcgcggcgagttcacatatcgtgct
tttatgaatggtaaattggatttggtacaggctgaatccgttctggctttgatcgaatcc
caatctcaacaggcagctaaattggctcttcgccaattaaaaggtcagctgtccagtaaa
ctggaagaagtcgaagacgacatgacttggatcttggctcacgcagaagcgagcatcgat
ttttctacggaaggtatcgatgtcgtcgattattctgttgttcaagttcgtcttaaaaaa
atcgaagcgacacttaaagatctggttgggactttcaaagttggccgccttttaaaggat
ggatttagagttgttctgacgggtcttccgaacgtgggaaaatccagtttgctaaatctt
ttcttggaagatgaacgcgctatcgtaacggatattccgggaaccactcgtgatgtgatt
cacggggatacttcttatgagggtgttaagttcactttcgtagacacggccggtcttcgt
gatgaggcgacggacctggttgagcgcattggtattcaaaaaagctacgaagctcaaaat
gaatccgatgtagttttctttgttttcgatatcgagaaggggttgggagctgaagagact
caaattttggagtccttggatcctcaaaaaaccttcattttagctaataaaatcgaccga
attggtgggtctaaacccctagaaatcgtcgaaaaagccattaaaaacagtaaatttttc
cagaaaatcgtagatccccaggctttcttcacaagaagggtgttctttgtcagtgctctt
gataaaaaggtgcgttcgagtgtccttcaagagcttgtccaggaattcgcggatatgcag
gtggaaaataccgttcttatttccaatgcccgtcactatgaaaacctggttcgtgcttta
gagaatactcaaaggtcacaaaccttggtggatcaggggatgggttctgaattcctggcg
ttagagcttaaggaatctctcatcgcgattcacgaaactttaggtaagcggttcgatgat
caaatcatggaccgagtatttaaagagttttgtatcgggaagtaa
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