Betaproteobacteria bacterium UKL13-2: AEM42_00540
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Entry
AEM42_00540 CDS
T04342
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
beb
Betaproteobacteria bacterium UKL13-2
Pathway
beb03030
DNA replication
beb03410
Base excision repair
beb03420
Nucleotide excision repair
beb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
beb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AEM42_00540
03410 Base excision repair
AEM42_00540
03420 Nucleotide excision repair
AEM42_00540
03440 Homologous recombination
AEM42_00540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
beb03032
]
AEM42_00540
03400 DNA repair and recombination proteins [BR:
beb03400
]
AEM42_00540
Enzymes [BR:
beb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AEM42_00540
DNA replication proteins [BR:
beb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AEM42_00540
DNA repair and recombination proteins [BR:
beb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AEM42_00540
NER (nucleotide excision repair)
GGR (global genome repair) factors
AEM42_00540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AMS33458
UniProt:
A0A142LML2
LinkDB
All DBs
Position
121024..123864
Genome browser
AA seq
946 aa
AA seq
DB search
MGHEHKSTSDALVGGSRKRLLLVDISSYFYRAFHAMPDFKSPSGEPTGAIYGVANMLNRL
RDDYPADYSACVFDPKGITFRDEIYPEYKANRQAMPEELAHQIGHIREVCEALGWPCIEV
SGVEADDVIGTLSVHASRRDVATIISTGDKDLAQLVNARVTLVNTMSNETLDVAGVLNKY
GVPPDRIVDYLALMGDTVDNVPGVEKVGPKTAVKLINEFGSLDGVMENAEKVKGVVGENL
KKARDWLPTGRTLVTVKCDVLLPFDFDTINHKDIDVTRLDQLYETFGFRTLRTQLHKRAG
AADGDTPITDAVTKAGAVFKQARKDSDATRWSSGAPAAVQTPFVATRRYQSILTDKALDE
WIAKLSDAALVCVDTETTSLDQMQAAIVGISFACEAGEAAYLPLRHAYAGAPDQLNFDTT
MARLRPWLTDPTKKKIGQNIKYDLHVFANHGIDVQGYLHDTLLESYVLESHQRHDMDSLA
SRHLGASTIRYEDVTGKGASQIGFDQVSIEKATEYSAEDADITVQLHGAMYQQIQSDEKL
RFIYTQIEMPVSHVLLTMERNGVLIDGSLLQQQSAELGLKMLELEKRAHEIAGQPFNLGS
PKQLGEILFDKQGIKPIKKTPGGAPSTDEETLEKLALDYPLPKAVLEYRSLSKLKSTYTD
KLPRMVNPKTGRVHTNYAQAVAVTGRLSSTDPNLQNIPVRTAEGRRIREAFIAPPGSVIV
SADYSQIELRIMAHLSGDKGLLDAFAKGEDVHRATAGEVFGVPREEVSAEQRRYAKVINF
GLIYGMSAFGLAANLGIERAAAASYIERYFARYPGVKAYMDRTRNEAQERGYVETVFGRR
LWLPDIRSGNQGRRQGAERAAINAPMQGTAADLIKLAMISVQDWLTQERLQTKLVMQVHD
ELVLEVPDAELVQVKANVPSLMTNIAKLDVPLVADPGVGLNWEVAH
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgggccatgaacataaatccacctcagatgccttggtcgggggcagtcgcaagcgtttg
ctgctcgtcgacatttcgagctatttctatcgtgcgtttcacgccatgccagacttcaaa
agcccgtcaggcgagccaacaggggcaatttacggcgtggcaaatatgctcaatcgtttg
cgtgatgactaccccgctgattatagcgcctgcgtttttgaccctaagggcataaccttc
cgggacgagatctatccggagtacaaagccaatcgacaggcgatgcccgaagagttggca
catcaaattggccatattcgcgaagtctgcgaagccttgggctggccgtgcatcgaagtt
tctggtgtggaggcagacgacgttatcgggacattgtcggtacacgccagccgtcgagac
gtggcgacgattatttcgacgggtgacaaagacctcgcgcaattggtcaatgcacgagtc
acgctggtaaacaccatgtcaaatgaaacactggatgtggcgggcgtgttgaataagtat
ggtgtaccgccggatcgaatcgttgactatctcgcattgatgggagataccgtcgacaat
gtgccgggggttgaaaaagtggggcccaagaccgctgtcaaattgatcaatgagtttggt
tcactcgatggcgtaatggaaaacgccgagaaggtgaaaggcgtggtcggcgaaaatctc
aaaaaagcccgcgactggttgccgactggccgcacgctggtgacggtgaagtgtgacgta
ctactacccttcgatttcgacaccatcaaccacaaagatatcgatgtcacgcggcttgac
cagctctatgagacgtttggctttcgcacacttcgaacacaactgcataaacgcgcgggc
gctgctgacggcgatacccctataacagatgctgtcactaaagcgggcgccgtgttcaag
caggcgcgcaaagacagcgacgcgactcggtggtcatccggcgcgcctgccgcagtgcaa
acgccgttcgtggcaacacgtcgataccaatccatcctcaccgacaaggcgctcgacgaa
tggatcgcgaagctaagtgacgcggccttggtttgcgtggataccgaaacaacgagcttg
gatcaaatgcaagccgcaattgtgggcatttcgtttgcctgcgaagcgggcgaggcggcc
tacctaccattgcgtcacgcctacgcgggtgcgccggatcaactgaactttgatacgacc
atggcgagacttcgaccttggctaactgatccgacaaagaaaaaaatcggacaaaacatt
aagtacgaccttcatgtttttgcgaaccacgggattgatgtgcaaggctatctacacgac
accttgctggaatcctacgtactcgaaagccatcagcggcatgatatggattcgctggcg
tcacgccacttaggcgcgtcgaccattcggtatgaagatgtcaccgggaaaggggcatcg
caaattggtttcgatcaagtttcaatcgaaaaagccaccgaatactcggcagaagacgcc
gatatcactgtgcaattgcacggtgcgatgtaccaacaaatccagtcggatgaaaagttg
cgcttcatttatacccaaattgagatgccggtgtcgcacgtcttgctaacgatggagcga
aatggtgtgctgattgatggatcgttattgcaacagcagtcagcggagttggggctaaaa
atgctcgagctggagaagcgcgcgcacgaaattgccgggcagccatttaacctcggatcg
cctaagcagctaggtgaaatcttgttcgacaagcaaggcattaagccgatcaaaaaaacg
ccaggcggcgcgccttcgacggatgaagaaacactcgaaaaactcgcgctcgattacccc
ctgcctaaagctgttcttgagtaccgaagcctgtccaagctcaagagcacctataccgac
aagctaccgcgtatggtgaatcccaaaacgggccgcgttcataccaattacgcacaggcg
gtcgcggtcaccggacgcctgtccagcacagacccaaatttgcagaatattccagtgcgg
acggcagaggggcgacgcatacgcgaagccttcatcgcaccgccgggaagtgtgattgta
agtgcagactattcgcagattgaactgcggatcatggcgcatctttcaggcgataagggg
ttgctcgacgcattcgccaagggcgaggatgtacatcgtgccacggctggcgaagtattc
ggtgtgccgcgtgaggaggtgtcggccgaacagcgccgctacgcgaaggtgattaacttt
ggattgatctacggcatgagtgcattcggcttggcggccaatctcggcattgaacgcgcc
gcagcggcaagttatatcgaacgatatttcgccagatacccaggtgtgaaagcctatatg
gaccgcacacgaaatgaggcgcaagagcgcggctatgttgagactgtatttgggcgacgg
ctgtggctaccagacattcgctcgggcaaccaaggtcgtcggcagggcgctgagcgcgcg
gcgattaatgcgccgatgcaagggacggctgcggacttgatcaagctcgccatgatttcg
gtccaagactggctcacgcaagagcgactgcaaaccaagctggtgatgcaagtgcatgat
gaactggtactcgaagtgccggacgcagagctggtgcaggtgaaagcaaatgtccccagt
ttgatgacaaacatcgcgaagctagacgtaccactcgtcgctgacccaggcgttggcttg
aattgggaagtcgcacactaa
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