Betaproteobacteria bacterium UKL13-2: AEM42_01025
Help
Entry
AEM42_01025 CDS
T04342
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
beb
Betaproteobacteria bacterium UKL13-2
Brite
KEGG Orthology (KO) [BR:
beb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
beb03400
]
AEM42_01025
Enzymes [BR:
beb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AEM42_01025
DNA repair and recombination proteins [BR:
beb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AEM42_01025
Prokaryotic type
AEM42_01025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AMS31336
UniProt:
A0A142LGJ0
LinkDB
All DBs
Position
221961..223385
Genome browser
AA seq
474 aa
AA seq
DB search
MKSVLFWFRRDLRVADNAGLYRALESGGRVYCTFIFDRDILDKLPSTSDRRVEFIWESLQ
EVHQRLVANGGGLIVRHASAKSEIPKLAVALGVDAVYTNTDYEPSAIVRDRAVAAELNKH
SIGFEAFKDTVVFEKSEVLTLAGKPFSVFTPYKNAWLKKVSDADLKPFPSEQLLDRLAPI
DSPAAMPSLASMGFETTNIKSILTCGMSGAAQLRDDFIDRMVDYKDTRDFPAVKGVSYLS
THNRFGTISIRELATIAHTETLRRTNLGAQTWLAELIWRDFYFQILWHSPHAAVSAYKPE
YDRLNWENDKELFAAWCEARTGYPIIDAAMRQLNQTGYMHNRLRMIVASFLTKDLLIDWR
WGEKYFADNLNDFDLSANNGGWQWAASTGCDAQPYFRIFNPITQSERFDPKGKFIRRYIP
ELSKLPDKFIHAPWTLPPLEAQTTNFVVGRDYPAPIVDHAVQREQALAMYKKIR
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtgtcttgttctggtttcggcgcgatctgcgtgtagctgacaatgcggggctg
tatcgtgcgctggaatcgggcgggcgggtttactgcacgtttatctttgaccgcgacatc
ttggacaaactgccgtcaacgtcggatcggcgcgtcgaatttatttgggagtcgttgcaa
gaagttcaccaacggctcgtcgccaatggtggcgggctcattgttcgtcacgcgtcggcc
aagagcgaaattcccaagcttgccgtagcgcttggggtcgatgcggtctataccaacacg
gactacgagccgtcggcaatcgtgcgtgatcgcgcagttgccgccgaactcaacaaacat
tccatcggcttcgaagcgtttaaggacacggtggtttttgaaaagagcgaagtgctgacg
ttggcgggaaaaccgtttagcgtgttcacaccctataaaaatgcttggctgaaaaaggtt
agtgacgcggatctcaagcctttccccagcgagcagctcctcgatcgactcgcccccatt
gactcgcccgccgccatgccctcattagcatcgatgggtttcgagacgactaacatcaaa
tcgatactgacctgcggcatgtcgggtgctgcgcaacttcgggacgacttcattgaccgc
atggtggactacaaagatacgcgcgactttccagccgtcaaaggcgtgtcgtatctgagc
acgcataatcgctttggcacgatctcgattcgtgaactggcaaccatcgcgcacacagaa
acgctacgtcgcacaaacttgggcgcgcagacatggctggcagagctcatttggcgcgac
ttttacttccaaatactatggcactcgccacacgcggctgtcagcgcctacaaacctgaa
tatgatcgcctgaattgggaaaacgacaaggaacttttcgccgcgtggtgcgaagctcgc
accgggtatccgatcatcgacgccgccatgcgtcagctcaaccaaacaggttatatgcac
aaccggctgcgaatgatcgtcgcaagctttttgaccaaggatttgttgattgattggcgc
tggggcgaaaaatacttcgccgacaacctcaacgactttgatctttcggcaaacaacggc
ggctggcagtgggcggcttcgacaggttgtgatgcgcagccttactttcggatattcaac
ccgatcacgcagagtgagcggttcgatccaaagggcaaattcatccgtcgctacatccct
gagctttccaagctgccggataaatttatccacgcgccttggacgctgcccccgctggag
gcacaaacaaccaactttgtcgtcggccgcgactaccccgcgccgattgtcgatcacgcc
gtgcagcgcgaacaggcgttggcgatgtataagaagatccgctga
DBGET
integrated database retrieval system
