Betaproteobacteria bacterium UKL13-2: AEM42_02230
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Entry
AEM42_02230 CDS
T04342
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
beb
Betaproteobacteria bacterium UKL13-2
Pathway
beb03420
Nucleotide excision repair
beb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
beb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AEM42_02230
03430 Mismatch repair
AEM42_02230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
beb03400
]
AEM42_02230
Enzymes [BR:
beb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AEM42_02230
DNA repair and recombination proteins [BR:
beb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AEM42_02230
MMR (mismatch excision repair)
Other MMR factors
AEM42_02230
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
AAA_12
AAA_11
ResIII
DEAD
DUF8203
Motif
Other DBs
NCBI-ProteinID:
AMS31517
LinkDB
All DBs
Position
482539..484914
Genome browser
AA seq
791 aa
AA seq
DB search
MFSNASPVSAVSPRLLENLNPEQLRAVTLPRESALVLAGAGSGKTRVLTTRIAYLIQSGQ
ASPGSILAVTFTNKAAKEMLTRLSSMMPINTRGMWIGTFHGLCNRLLRAHYRDANLPQTF
QILDSADQQSAIKRLLKGMNVDDEKFKPREMAYFINGAKDQGLRAHMVEARDEFTRRQVE
IYQAYDEQCQREGVADFAELLLRCYEVLSKNAPLLEHYRGRFQFVLVDEFQDTNRLQYQW
IQLLAGKNAAVFAVGDDDQSIYGFRGAEAANMRDFQRDFAHGNIIKLEQNYRSQGNILDA
ANAVIAHNKDRLGKNLWTDEGKGEPLRIYAASTDADEAQFVIDEVKALHREGKDLSNMAL
LYRSNAQSRVLEHTLFRAGIAYRVYGGMRFFERQEVKHALAYLRLAGNPNDDGAFSRVVN
FPPRGIGARSAEQVQELAQRYNVSMYEAALNGIAQGTITGRSAAAIGTFLKVIEGLKASS
TAVSLGELVDEATEKSGLKAHYQTEREGADRLENLAELVSACTQFEESYEGDDTTLVGFL
THASLEAGDHEASASDDALQLMTVHAAKGLEFDHVFLGGLEEGLFPHENSMNDFAGVEEE
RRLMYVAITRARKRLYLSYAAQRMLHGQTRYGIVSRFLDEIPPALCKWIVVPEKQAAYGA
PANKGYGGGGWEKSGARGSYSAEMRGAGQSGGGQVGGGQVYTGFKQNIVKDEKAVEYGRE
GAPDTSRANFETARTDAFPFRVGQTVAHLKFGEGVVLSFEGRGTDARVQVKFRVEGTKWL
ALQYAKLTAVN
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgttctccaacgcctcacctgtctctgccgtttccccccgtcttctcgaaaacctgaac
cccgagcaacttcgcgctgtcactctgccgcgtgagtcggcgctggtgctcgccggtgcc
gggtcgggcaaaacgcgcgtactcacgacacgcattgcctacttgattcaatcgggtcag
gcctcacctgggtcgatcctcgcggtcacgttcaccaacaaagcggcgaaggaaatgttg
acacggctctcgtcgatgatgccgatcaacacgcgtggcatgtggatcgggacttttcac
ggcctgtgtaatcgcctactgcgtgcacattaccgcgacgcaaatttgccgcagaccttt
cagattcttgattccgcagaccaacagtcggcgattaagcggttactcaaggggatgaac
gtcgacgatgaaaagttcaagccgcgcgagatggcgtactttatcaacggtgcgaaggac
caggggttacgcgcccatatggtcgaggcgcgtgacgaattcacccgccgccaagtcgag
atctatcaagcctacgatgaacagtgccagcgcgagggggtcgcggattttgccgagctg
ctattgcgttgttatgaggtcttatccaaaaatgcgccgttgctggaacactatcgaggg
cgttttcagtttgtgctggtagatgagtttcaggacaccaaccgtttgcagtaccagtgg
atacagcttctcgcgggaaaaaatgcggcggtgtttgctgttggtgatgacgatcaatcg
atctacgggttccgcggggcagaagccgccaacatgcgcgatttccagcgtgacttcgca
cacggcaacatcatcaagctagagcaaaactaccgatcacagggaaacattctcgacgcc
gcgaatgcggtgatcgcgcacaataaagatcggctcggcaagaacctttggaccgacgaa
ggcaagggcgagccgttacgaatttatgcggcatctactgatgccgatgaagcgcagttt
gtaatcgatgaagtgaaagccttgcaccgcgagggcaaggatctttccaatatggcgctc
ttgtatcgatccaacgcacagtcgcgcgtacttgagcacacactctttcgcgccggtatt
gcctaccgtgtttacggcggtatgcggttctttgagcgccaagaagttaaacatgcgttg
gcgtatttgcggcttgcaggtaaccctaacgatgacggcgcgttttcgcgggtggtcaat
ttcccaccgcgcggtatcggcgcacgttcggctgaacaagtacaggagctcgcgcaacgc
tacaacgtctcgatgtatgaggccgcactcaacggcatcgcgcagggcaccatcactgga
cgtagcgccgcggccattggcaccttccttaaagtcatcgagggcttgaaggcatcatca
acagcagtctcgctcggcgagcttgtggacgaggcaacggaaaaatctggcctcaaggct
cactatcaaactgagcgcgaaggtgccgaccggcttgaaaacttggcggaattggtcagc
gcgtgtacacaattcgaagagagctacgagggggacgacaccaccctggttggctttttg
acgcacgccagcctagaggcgggtgaccatgaagcctcagcgagtgatgatgccttgcaa
ctgatgaccgtacacgccgcgaaaggtctcgagtttgatcatgtatttcttggcggcttg
gaagaaggcttgtttccccacgaaaactcgatgaacgactttgccggggttgaggaagag
cggcgtctgatgtatgtcgccatcacacgcgcaagaaagcggctctacctttcgtatgcc
gctcagcgcatgctgcatggccagacacgttacggaatcgtctcgcgttttctcgacgaa
attccacccgcgctgtgcaagtggatcgtggtgccggaaaagcaggccgcgtatggtgca
ccagccaacaaaggttacggtggtggtggctgggaaaagtccggcgcacgaggttcctat
tccgcagagatgcggggtgctgggcaaagcggtggtggccaggttggcgggggccaagtg
tatacgggcttcaaacaaaacatcgtcaaggatgaaaaggccgtcgagtacggacgcgaa
ggggcaccagatacctcacgcgcaaactttgaaactgcacgcaccgacgctttcccattc
agagtggggcaaaccgtggcgcacctaaaatttggcgagggtgtggtgttgtcgttcgaa
ggtcgcggcaccgacgcacgagtgcaagtgaagtttcgtgtagaaggcaccaagtggttg
gcgctgcaatacgccaaactgaccgcagtgaattag
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integrated database retrieval system
