Betaproteobacteria bacterium UKL13-2: AEM42_11125
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Entry
AEM42_11125 CDS
T04342
Name
(GenBank) cytochrome C biogenesis protein CcmE
KO
K05396
D-cysteine desulfhydrase [EC:
4.4.1.15
]
Organism
beb
Betaproteobacteria bacterium UKL13-2
Pathway
beb00270
Cysteine and methionine metabolism
beb00470
D-Amino acid metabolism
beb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
beb00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
AEM42_11125
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AEM42_11125
Enzymes [BR:
beb01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.15 D-cysteine desulfhydrase
AEM42_11125
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
AMS32793
LinkDB
All DBs
Position
complement(2488072..2489091)
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AA seq
339 aa
AA seq
DB search
MDLSRFPRRRYTPFATPIELLPNLTKALGGPNIYIKRDDMLGLFPGGNKTRKLEFLVADA
LAQGADTLITCGAPQSNHCRITLAAAAKEGLKCRFVIEERIPNSYDEDANGNHFMFRLMG
VEDITVVPAGSDMLAAMQKVSDDLASQGRRGYIIPGGGSNAIGALGYVACVQEMLAQLFE
QALTIDHIIVGSGSSGTHAGMVAGMYGMNAHIPITGIGVSRDPENQEPLVYREVLATAKL
LNMHGEPPRELVKTDGGYWRPKYSLPNQRMVEAVQMLAQLEGIPLDPTYTGKIMAGLIGM
VRAGAFGKDDNVLFIHTGGMPSLFASPETVLGRVPVTHV
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggacttatcccgcttcccacgtcgtcgttacacccccttcgcaacaccgattgagttg
ttgccaaatctgaccaaggcgctgggtggaccgaacatttacattaagcgcgacgacatg
ctggggctattccccggtggtaacaagacgcgcaagttggagtttttggttgccgatgca
ttagcccaaggcgcggatacgctcatcacctgtggcgcgccacaatcgaatcactgtcgt
atcacgcttgccgcagcggctaaagaaggtttgaagtgtcgctttgtgattgaagagcgc
atcccgaatagttatgacgaagacgccaacggcaatcactttatgtttcggctgatgggg
gttgaagatatcaccgtcgtacccgcaggcagcgatatgttggccgctatgcaaaaagtg
tcggatgatctcgcgtcgcagggccgcaggggctacatcatcccaggaggtggctcgaac
gccattggcgcactcgggtatgttgcctgtgtgcaggaaatgttggcgcagttgtttgaa
caggcgctaacgattgatcacatcatcgtcggttcgggtagttccggcacgcacgcgggc
atggtcgcgggcatgtacggcatgaatgcgcacattccgattactggcattggtgtgagt
cgcgatcctgaaaatcaggaacccctcgtatatcgcgaagtattggcgacggccaaacta
ttgaatatgcatggcgagccgccacgcgagttggtcaaaacagacggcggctattggcga
ccgaaatactctttgccgaaccagcgcatggtcgaagcggtgcaaatgctggcgcagctt
gagggcattccgctcgatccgacctacaccggaaaaatcatggcagggttgatcggcatg
gttcgcgctggcgcattcggaaaagatgacaacgtcttgttcatccacaccggcggtatg
ccgtcattgtttgcgtcacctgagaccgtcttggggagggtgccagtgacgcacgtctga
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