Betaproteobacteria bacterium UKL13-2: AEM42_13695
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Entry
AEM42_13695 CDS
T04342
Name
(GenBank) hypothetical protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
beb
Betaproteobacteria bacterium UKL13-2
Brite
KEGG Orthology (KO) [BR:
beb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
beb03400
]
AEM42_13695
Enzymes [BR:
beb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AEM42_13695
DNA repair and recombination proteins [BR:
beb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AEM42_13695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DUF4440
DEAD
AAA_30
MDY2_C
Motif
Other DBs
NCBI-ProteinID:
AMS33906
UniProt:
A0A142LNW0
LinkDB
All DBs
Position
complement(3038490..3042161)
Genome browser
AA seq
1223 aa
AA seq
DB search
MTSVMHVIDQDERWRALNVGQSFIVRAPAGSGKTRLLIQRYLALLATVDEPEEVIAITFT
RKAAAEMRARVLGAFAAANESGAGVDDGGDDSQTRVLAQQVLARDTVRGWQLLANPLRLR
IQTIDSLNTSLTRQMPMMTRFGAQPESVDDATVLYRRAARQLLAQINDDEPVADDIATLL
AHLDNNLGVVESLIADMLRGRDHWLRNLPKMHQREALEAALARVRKHAVAEVAALYPAIE
RTETLDLVRFSGQNLLKEAVDSALSRCAKLEAFPSGTLASLPAWLAIADLLLTKEGEWRK
PGGINKKIGFPTSKVKEEKALLDAMKARIGALLESMAADDVRGASASGNLANKLDALRAL
PPGEYSDAEWEVLGAIVRLLPYATVRLWEVFGEEGECDFTEIAQAASRALGSDDEPTDLA
LALDYRIRHLLVDEFQDTSFAQFELLEKLTRGWSLGDGRTLFVVGDPMQSIYRFREAEVG
LFLRARHAGLGGVSLTPLTLSVNFRSEPGVVAWVNNTFSRLMPGTEDAATGVVPYARCVA
FGGDGQAADDAAHMHWTVLHRGNTTDAKPAAATDPAEIEAQKVIDIIRQTRRDKPDASIA
LLIRNRGHLRQIVPALKAADILFHAVDIDPLKDRPVVQDLFALTRALLHLADRIAWLAIL
RAPWCGLTLNDLAALTASVLPVDGTLTPDPRTVWEMINDAPRLETLSTDGRQRIEKIRNV
LHTALQMRRRVPLRDAVEQCWLALSGPACLDAPSDLDDAMTFLDLLETEAQEQSGGAQIV
SLSSLQAQIDRLYSGGGRLANDINNADQADKADKADKADSTNTVPPLQIMTIHKAKGLEF
DTVIVPGLDRSPRRDDRKLLVWTEQANVDSGGHELLLAPIRETGADDDADAIYRYITKLD
QAKQQHEDVRLLYVAATRAERRLHFLATLAIKDKDGVPEIVAPKAASLLAALWPALSEQH
LPSVTSLTSLTSLTSDTALGRKDAATTEKKTPPTSRIEVTRPTRLVLDFPLPEMVPAVLP
NSVNAFGEGKPIDASTPQIDFEWATDTARHVGTVVHTFLQRIASDGIDAWNPQRVTVSRQ
LFQAELTRLGVGNNEVNAASDRIEVALNKTLADERGRWALSTHHDARSEWRLTGLIDGAL
TNVALDRTFVDADGDRWIIDFKTGSHEGADVEAFLDNEQRRYSAQLEIYAALVQAMSTDQ
KPIRLGLYFPMLGGWREWSWRGV
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgactagtgtgatgcacgtcatcgatcaggacgagcgttggcgtgcgctcaacgtcggc
caatcgtttatcgttcgagcgcccgctggctccggcaaaacacgtctgctgattcagcgt
tatctcgcgctgctagccaccgtggatgagccggaagaagtgatcgctattaccttcacc
cgcaaagcggcagcagaaatgcgtgcgcgggtgctcggtgcgtttgcggcagccaatgag
agtggtgcgggtgtcgacgatgggggcgacgattcacaaacccgcgtgttagcgcaacaa
gtgttggcacgtgacactgtgcgcggctggcagttgttggcaaatccgttgcgcctacgt
atccagaccatcgactcactaaacacttcgttgacgcgacaaatgccgatgatgacgcgc
tttggtgcgcagccggaaagtgtcgatgacgcgacggtgttgtatcgccgcgcagcacgc
caattgctggcgcaaatcaatgacgacgagccggtcgccgacgatatcgccacactattg
gcgcatctcgacaacaacctcggcgtggtcgaaagcctaatcgccgacatgttgcgtgga
cgtgatcattggttacgcaacctgccgaagatgcatcagcgcgaagcattagaagccgcg
ctggcgcgggtgcggaaacacgcggtggcagaagttgcggcgttatatccggccattgaa
agaaccgaaaccctagatttggtgcgcttttccggacaaaacttgctcaaagaggccgtc
gatagtgcactttcgcggtgtgcaaagctcgaggcctttccaagtggtacgttggcgtcg
ctgccagcatggctggcgattgccgatttgcttctgactaaagaaggtgagtggcgaaaa
ccgggtggcatcaacaagaaaattggctttccgacgagcaaagtcaaggaagaaaaagcg
ctgctcgatgcgatgaaggcgcgtatcggtgcgctgttggaatcgatggcggctgatgat
gtacgaggtgcgtctgcttccggtaatctcgccaacaagttagacgcattgcgtgcactg
ccgcccggcgaatactccgatgcggagtgggaggtgttgggtgcgattgtgcggctcctg
ccctacgctaccgtgcggttgtgggaggtattcggtgaggaaggcgagtgtgacttcacc
gaaattgcgcaggcggcctcacgcgcattggggtcggacgacgagccaaccgatctcgca
ctggcgctcgactatcgcatccgccatttgctggtcgatgagtttcaagatacgtcgttt
gcccaattcgagttactggaaaaactcacccgtgggtggagcctcggtgatgggcgcacc
ttgtttgtggtcggcgacccgatgcaatcgatctaccgcttccgcgaggcggaggtggga
ttgttcctgcgcgcgcgccacgccggcttgggaggtgtgtcactgacgccgctgacccta
tcggtgaactttcgctctgagcccggggtggtggcgtgggtgaataacacctttagccgg
ttgatgccaggcacggaagacgccgcaaccggcgtggtgccctatgcgcgatgtgttgcg
tttggcggggatgggcaggcggcagacgatgccgcgcacatgcactggacggtacttcat
cgaggtaacacaaccgacgcgaagccggcagcggcaacggaccccgccgagattgaagcc
caaaaggtcatcgacattattcggcaaacgcgccgcgataaacctgatgcctctatcgcg
ctgctgattcgcaatcgcggccacctgcgccagatcgtaccggcgttgaaagcggcggac
atcttgtttcatgccgtagatatcgatccgctcaaggatcggccggtggtacaggatttg
tttgccctcacacgagcgctgttgcacttggctgatcgtattgcatggctggctatcctg
cgagcgccttggtgtgggctgacgttaaacgacctagccgcactgacggcgagtgttttg
ccggttgatggtacgttaacgccagacccgcgtactgtgtgggaaatgatcaacgatgca
ccgcgactagaaacactctccacagacgggcgtcagcgaatcgagaagatacgcaacgta
ttacacacggcattacaaatgcgtcgccgtgtgccgctacgggatgccgttgaacaatgc
tggttggcgttatcggggcctgcttgtttggacgcaccatccgatctcgacgacgccatg
acatttctcgatttgcttgaaaccgaggcacaggagcaaagtggcggcgcacagattgtg
agcctcagttcgctgcaagcgcagatagatcgtttgtattcgggcggcgggagattggcc
aacgatatcaacaacgccgatcaagccgataaagccgataaagccgataaagccgacagt
accaacacggtaccgccgttacagattatgaccatccacaaagcgaagggccttgagttt
gatacggtaatcgttcccggcttggatcgctccccacggcgtgacgataggaagttattg
gtttggaccgagcaagcgaatgtggatagcggtgggcacgaactcttgctcgcaccgatc
cgcgagacgggggcggatgatgacgcagatgccatttaccgatacatcaccaaactcgat
caagcaaaacagcagcacgaagacgttcgcttgctctatgttgccgccacacgcgccgag
cggcgcttacattttttggccacgctggcaatcaaagacaaagacggtgtgccggaaatc
gttgcgccaaaagcggcgagcctgctcgcggcactctggcctgcgctaagtgaacaacat
ttgccatcggtcacgtcgctgacttcgctgacttcgctgacttcggatactgcgttaggt
cgcaaagacgcggcgacgacagaaaaaaagacaccgcccaccagccgtattgaggtgact
agaccaactcgcctcgtcctcgattttccgctgccagagatggtgccggcagtcttgccg
aacagcgtgaatgcgttcggcgagggcaaaccaatcgacgcatcaaccccacagatcgac
tttgaatgggcgacggataccgcgcgccatgtcgggacagttgtgcacacgttcttgcag
cgcatcgcgtcagatgggattgatgcttggaacccacaacgcgtcactgtgtcccgccaa
ttatttcaagcagaactcacccgtttgggcgtgggcaacaacgaggtgaatgcagcaagt
gatcgcatcgaggtggccttgaacaaaacgctcgccgatgaacgcggacgctgggcgctg
agcacacaccacgatgcacgttcggagtggcgactcaccggcctgatcgacggcgcgctt
acgaatgttgcgctggatcgcacgtttgttgatgccgacggagatcgttggatcattgac
ttcaagacgggtagtcacgaaggtgccgatgttgaagcgtttctagacaacgaacaacgg
cgttactccgcgcaattggaaatctatgctgcgctggttcaggcgatgtcaactgaccaa
aaaccaatcaggctggggttgtattttccgatgttgggtggttggcgcgaatggagttgg
cggggtgtttga
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