Betaproteobacteria bacterium GR16-43: BWI17_00745
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Entry
BWI17_00745 CDS
T04726
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
beba
Betaproteobacteria bacterium GR16-43
Pathway
beba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
beba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BWI17_00745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
beba03021
]
BWI17_00745
03019 Messenger RNA biogenesis [BR:
beba03019
]
BWI17_00745
Transcription machinery [BR:
beba03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BWI17_00745
Messenger RNA biogenesis [BR:
beba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BWI17_00745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
NACHT
Spore_III_AA
AAA_25
AAA_22
Motif
Other DBs
NCBI-ProteinID:
APV48339
LinkDB
All DBs
Position
141794..143056
Genome browser
AA seq
420 aa
AA seq
DB search
MYLSELKLKHVQELVDMANVAELEGANRLRKQELIFALLKAHAKKGEAIFGDGTLEVLQD
GFGFLRSPDTSYLAGPDDIYVSPSQIRRFNLHTGDSIEGEIRTPKDGERYFALVKVDKVN
GEPPENAKSKILFENLTPLHPDESLVLERDIKAEENLTGRVIDIMAPIGKGQRGLIISPP
KAGKTVLMQHMAHAITSNYPECVLIVLLIDERPEEVTEMTRTVKGEVVASTFDEPATRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPASGKVLTGGVDSNALQRPKRF
FGAARNVEEGGSLTIIATALIDTGSRMDDVIYEEFKGTGNMEIHLDRRMAEKRVYPSINV
NRSGTRREELLIAPEILPKVWVLRKLLFGMDELEATEFLLDKLRATKNNDEFFASMKRGN
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtacttatccgaactcaagctcaaacacgtccaggagctcgtcgacatggccaatgtg
gccgagctcgagggcgccaaccggcttcgcaagcaggagttgatcttcgcgctgctgaag
gcccacgccaagaagggcgaggccatcttcggcgacgggacgctcgaagtgctgcaggac
ggcttcggcttcctgcgctctccggacaccagctacctcgcgggcccggacgacatctac
gtctccccctcgcagatccgccgcttcaatcttcacaccggggattcgatcgagggcgag
atccgcacgccgaaggacggcgagcgctacttcgcgctggtgaaggtcgacaaggtcaac
ggcgagccgccggagaacgcgaagagcaagatcctcttcgagaacctcacgccgctgcac
ccggacgagtcgctcgtcctcgagcgcgacatcaaggccgaggagaacctcaccggccgc
gtgatcgacatcatggcgcccatcggcaagggccagcgcggcctcatcatctcgccgccc
aaggccggcaagacggtgctgatgcagcacatggcgcatgccatcacttccaactacccc
gagtgcgtgctgatcgtcctgctgatcgacgagcgcccggaagaagtcaccgagatgacc
cgcaccgtgaaaggtgaagtggtcgcctcgacgttcgacgagcccgccacgcgccacgtg
caggtggccgagatggtgatcgagaaggccaagcgcctggtcgagcacaagaaggacgtc
gtgatcctgctcgattcgatcacgcgcctcgcccgtgcctacaacaccgtggtgccggcc
tccggcaaggtgctcacgggcggcgtggattccaacgccctgcagcgcccgaagcgtttc
ttcggcgccgcgaggaacgtcgaggaaggcggctcgctcacgatcatcgcgacggccctc
atcgacacgggctcgcgcatggacgacgtgatctacgaggaattcaagggcaccggcaac
atggagatccacctggatcgccgcatggccgagaagcgcgtctacccgtcgatcaacgtg
aaccgctccggcacgcgccgcgaggaactgctgatcgcccccgagatcctcccgaaggtc
tgggtgctccggaagctcctgttcggcatggacgaactggaagccacggaattcctgctc
gacaagctgcgcgccacgaagaacaacgacgagttcttcgcgtcgatgaagcggggcaac
tag
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integrated database retrieval system
