Betaproteobacteria bacterium GR16-43: BWI17_02940
Help
Entry
BWI17_02940 CDS
T04726
Name
(GenBank) hypothetical protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
beba
Betaproteobacteria bacterium GR16-43
Pathway
beba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
beba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BWI17_02940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
beba03019
]
BWI17_02940
Enzymes [BR:
beba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BWI17_02940
Messenger RNA biogenesis [BR:
beba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BWI17_02940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
DUF3990
Motif
Other DBs
NCBI-ProteinID:
APV48729
UniProt:
A0A1P8FF95
LinkDB
All DBs
Position
586019..587668
Genome browser
AA seq
549 aa
AA seq
DB search
MSTTFESLGLLPELLRAIAEQGYTEPTPIQAQAIPVVLSGRDLLGAAQTGTGKTAGFTLP
LLQRLAPFASKSFSPAMHPVRALILTPTRELAIQVHESVRTYGKHIPLKPFCVYGGVNIN
PQITELRKGVEILVATPGRLLDLTGQKAVDLRQVQVLILDEADRMLDMGFIPDIKRIISL
LPPIRQNLLFSATFSDEIRRLSAQFLRDPATVEVARRNTPAELVTQYAYQVDAAKKRPLL
AHLVKTHDWSQVLVFCKTKHGANRLASQLIRDGINADAIHGNKAQNARIRSLEGFKNNTV
RVLVATDIAARGLDIEALPHVVNFDLPHVPEDYVHRIGRTGRAGMEGEAISFISSEDRPL
MSAIENLIKKKIDRREVPGLSESSIRENMVESREERAPRGGGGGRGGRSGRGGGGGGGRS
QQPQREAQKPREPQQPREPRPPREPQQARDPQQARDPQQQRESQREAQSQRREPRKPQGA
SKPQGGREYRDNRSDRSPPPRPRDSGGGIDFSKPYEPAATAASEPAGGETAPKRRGPAAA
VPALFRRKG
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atcagtacgacgttcgaaagcctcgggctgctgcccgagctgctgcgcgccatcgcggag
caaggttacacagagcccacccccatccaagcccaggccatccccgtcgtcctttccggg
cgcgacctgctgggcgccgcccagacgggcaccggcaagaccgccggcttcacgctgccg
ctgctgcagcgcctggcgcccttcgcgagcaagagcttctcgcccgcgatgcacccggtg
cgcgcgttgatcctcacgcccacccgcgaactcgcgatccaggtccacgagagcgtgcgg
acgtacggcaagcacatccctttgaagcccttctgcgtctatggaggtgtgaacatcaat
ccgcagatcaccgagctgcgcaaaggggtcgagatcctcgtggccacgccgggccgattg
ctggacctcacgggccagaaggccgtcgacttgcgccaggtgcaggtcctcatcctcgac
gaagccgaccgcatgctggacatgggcttcattccggacatcaagcggatcatcagcctg
ctgccgccgatccgccagaacctgctcttctcggccacgttctccgacgagatccgccgg
ctctccgcgcagttcctgcgcgatccggccacggtcgaagtcgcgcgccgcaacacgccc
gccgagctcgtgacgcaatacgcctaccaggtcgacgccgcgaagaagcgcccgctgctc
gcccacctcgtgaagacccacgactggtcgcaagtgctcgtgttctgcaagaccaagcac
ggcgccaaccgcctcgcgagccagctgatccgcgacggcatcaacgccgacgcgatccac
ggcaacaaggcccagaacgcgcgcatccgttcgctcgagggattcaagaacaacaccgtg
cgggtcctcgtcgccaccgacatcgccgcgcgcggcctcgacatcgaggcgctgccgcac
gtggtgaacttcgacctgccgcatgtgcccgaggattacgtgcaccgcatcggccgcacc
ggccgcgcgggcatggaaggtgaagcaatctcgttcatttcttccgaagatcgtccgctg
atgtcggcgatcgagaacctcatcaagaagaagatcgaccggcgcgaagtgccgggcctt
tccgagtcgtcgattcgcgagaacatggtggagtcgcgcgaggagcgcgcgcctcgcggc
ggcggcggcggccgcggcggacgcagcggacgtggtggcgggggcggcggaggccgatcc
cagcaaccgcagcgcgaagcgcagaagcctcgtgagccgcagcagccgcgtgaaccgcgc
ccgcctcgcgaaccgcagcaagcgcgcgatccgcaacaggcgcgcgacccgcagcagcag
cgggagtcacagcgcgaggcgcagtcgcaacggcgtgagccgcgcaagccgcagggcgcc
tcgaaaccccagggcggtcgcgaatatcgcgacaaccgttccgaccgctcgccgccgccg
cgcccgcgcgattcgggaggcggcatcgatttctcgaagccctacgaaccggccgcgacg
gcggcctcggagcccgcgggcggcgagaccgcgcccaagcgccgtggcccggccgcggcg
gtccccgcactcttccgccggaaaggctga
DBGET
integrated database retrieval system