Betaproteobacteria bacterium GR16-43: BWI17_07130
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Entry
BWI17_07130 CDS
T04726
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
beba
Betaproteobacteria bacterium GR16-43
Pathway
beba03420
Nucleotide excision repair
beba03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
beba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BWI17_07130
03430 Mismatch repair
BWI17_07130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
beba03400
]
BWI17_07130
Enzymes [BR:
beba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BWI17_07130
DNA repair and recombination proteins [BR:
beba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BWI17_07130
MMR (mismatch excision repair)
Other MMR factors
BWI17_07130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C
UvrD_C_2
AAA_16
FtsK_SpoIIIE
PhoH
DEAD
nSTAND3
SLFN-g3_helicase
AAA_29
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
APV49473
UniProt:
A0A1P8FH75
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All DBs
Position
complement(1424482..1426209)
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AA seq
575 aa
AA seq
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MIEGLSTQRKDLLAAPGHLLVMGGPGSGKSTIALLKASAEFQAGGLSKHQHVLFLSFARP
TIARVAELATKLIDQGSRASLEIGTYHGFFWKLLRSHGYLIFGPGIIRILPPPEAAVRLA
DMDSREAREAEKLRLFEEEGFLHFDLFATVATDLLVRSKRLKQVICKSYPIVIVDEFQDT
NEQEWAFIRALGDSSRLIALADPEQRIYEFRGADPKRIGEFTEAFKPKIFDFGTDNFRSN
GRDITTFGNDLLVGKVAGKTYQDVTVVRYQFYQGLNSLFPVKASVIKRIKELLKEPANAW
SLAVLVPSKRMMLQISDYLDIKSDGLPALRHDVALDTEAPALAAIALAGLLEGGNSASAI
ADRLVEDLIQHIRGRKGNESPPQAELKLAIALGTFLTTGAVTGKNRRRIVDSIGTVAEKR
MSLSLSGDPEADWLAVRRLLSDSDAPEIQQLSDDVKYLRLLHKGAVLRSRLGDLWRQGGG
YRNAPAAVRDALMQEHFSSTVRDWRGIHVMTIHKAKGKEFTEVVIAEGLHQGKIVRQNAT
PNEVAQARLALRVAVTRATNHATILTPKSDPCPLL
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagggactcagcacacagagaaaggatcttctggcagcgccgggtcacctactg
gtaatgggagggccagggtcggggaagtccactatcgctttactgaaagctagcgcggaa
ttccaggcaggtgggctaagcaagcatcagcacgtgcttttcctcagttttgctcgaccg
accattgcgagggttgccgaactcgcaaccaagctcatcgaccaaggttctagggcgtcc
cttgagattggcacctatcacggcttcttctggaagttgctgcgtagccacggatacctc
atcttcggccccgggatcatccgaatacttcccccgcccgaagccgcagttcgactcgcg
gatatggacagccgcgaagctcgcgaggctgaaaagctacgcttgttcgaggaagaaggt
ttccttcacttcgacctgttcgccacagtagcaacggacctcttggtcagaagtaaacga
ctaaaacaggtcatctgcaaatcctacccaatagtgatagtcgatgaattccaagacacc
aacgaacaagagtgggctttcattcgtgcgcttggcgattcaagtcgcctcatagccctt
gcggatcctgagcagagaatctatgagtttcgcggagcagatccaaagcggatcggcgag
ttcaccgaggcgttcaaaccgaagatatttgactttggcacggacaacttccggagcaat
ggacgcgacatcactacgtttggaaacgatctgcttgttggcaaggtcgctgggaaaacc
tatcaggacgttaccgtcgtgcgctatcagttctatcagggactaaattcgctattcccc
gtaaaggcatcggtgataaagcgaatcaaggaactgctaaaagaacccgccaatgcgtgg
tcgctggcggtgttggttccctcaaaacgcatgatgcttcagatttccgactacctcgac
attaagtcggatggactgcctgccttgcgacacgacgtcgcactggacacagaggcgccc
gcgctagccgcaatcgcgttggccggactcttagaaggcggaaactcggcatctgctatc
gccgatcgcttggtcgaggatttgattcagcacattcgtgggcgcaaaggcaacgaatct
ccgccccaagcagagctgaaactagcgatagcgcttggcacgttcttgacgacgggagcg
gtcacgggaaagaaccgccggagaattgtagacagcattggtacggttgcagagaagagg
atgagcctctctctttccggcgacccggaggctgattggctcgccgtacgacgactacta
tctgattctgacgcaccagagattcaacagctctcggacgacgtcaagtaccttcgactg
cttcacaaaggggccgtgctccgatctcggctcggagatctctggcgacaaggcggcggc
tatcgaaatgctccggctgcagtccgagacgcgctgatgcaggaacacttctcctcgact
gtccgcgattggcgcggcatccacgtcatgacgattcacaaagccaaaggcaaggaattc
accgaagtagtgatcgccgaagggctgcatcaagggaagatcgttcggcagaatgcgacc
ccgaacgaggttgctcaggctcgcttggctttgcgagtagccgttaccagagcgacgaac
catgcgaccatcctcacccccaagagtgatccctgcccgctcttgtga
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