Betaproteobacteria bacterium GR16-43: BWI17_08780
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Entry
BWI17_08780 CDS
T04726
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
beba
Betaproteobacteria bacterium GR16-43
Pathway
beba03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
beba00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BWI17_08780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
beba03021
]
BWI17_08780
03400 DNA repair and recombination proteins [BR:
beba03400
]
BWI17_08780
Enzymes [BR:
beba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BWI17_08780
Transcription machinery [BR:
beba03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BWI17_08780
DNA repair and recombination proteins [BR:
beba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BWI17_08780
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
APV49763
LinkDB
All DBs
Position
1751801..1755874
Genome browser
AA seq
1357 aa
AA seq
DB search
MTYSFTEKKRIRKSFAKRAAVLDVPFLLATQINSYAEFLQAESTADGRKESGLQAAFQSV
FPISSHSGSARLEYVSYALGEPPFDVVECQQRGLTFASPLRAKVRLVIMDREASKPTIKE
MKEQEVYMGEIPLMTRNGSFVINGTERVIVSQLHRSPGVFFEHDRGKTHSSGKLLFSARV
IPYRGSWLDFEFDPKDYLYFRVDRRRKMPVTILLKALGYKPEQILEHFFSFDQFHVTKKG
IEFDVVPERMRGEIARFDIVTKAGKVLVQKDKRITVKHIREMEAAGMKKLTVEPDFMLGR
ALAKSLVNKETGEVVANVNDEITEALMKKILDAGVEDVKTIYTNDLDQGPYISQTLRIDE
TVDQMNAQVAIYRMMRPGEPPTEEAVKTLFSGLFFNEDRYDLSDVGRMKFNRRVGNDQLT
GPMTLSNEDIVAVIKILVELRNGRGEIDDIDHLGNRRVRSVGELAENQFRSGLVRVERAV
RERLSQAESEQLMPHDLINAKPVSAAIKEFFGSSQLSQFMDQTNPLSEITHKRRISALGP
GGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYARTNEYGFIETPYRKVK
DAKVTKDIEYLSAIEEGKYVIAQANAEVDKTGKFVDELVSCRHRNEFTLSGPEKIEYIDV
APSQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRAEKSLVGTGIERTVAIDSGTA
VQARRGGRIDYVDAGRIVVRVNDNETRPGEAGVDIYNLTKYTRSNQNTNINQRPLVKVND
QIAAGDVVADGASTDMGELALGQNLLVAFMPWNGYNFEDSILISERIVAEDRYTSIHIEE
LVVVARDTKLGAEEITRDISNLSERMLSRLDESGIVYIGAEVEAGDVLVGKVTPKGETQL
TPEEKLLRAIFGEKASDVKDTSLRVPSGINGTVIDVQVFTREGIQRDKRAQQIIDEQLKD
YRKDLHDQLRIVEDDLFARLERMLTGKTAKGGPKKLAKGAKIVKTYLAELERHEWFDIRL
TDDDAAVQLEQLRESLDLTRKEFDKAFEEKKKKLTQGDELPPGVQKMVKVYVAVKRRLQP
GDKMAGRHGNKGVISKIVPVEDMPFMADGTPVDIVLNPLGVPSRMNVGQILETHLGWAAK
GLGHRIQEMLRAQEAPAKLRKYLEKIYNGAGKKEDLASFTDEEIIELSRNLTAGVPFATP
VFDGATEVEIKDMLELAGLPRTGQITLYDGRTGDAFDRQVTVGYMHILKLHHLVDDKMHA
RSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYTLQEMLTVKSDDTQGRTKVY
ENIVKGEHKIEAGMPESFNVLVKEIRSLAIDIDLERY
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atgacctactctttcaccgagaagaaacgcatccgcaagagcttcgccaagcgcgcggcc
gtgctggacgttcctttcctcctcgcaacccagatcaactcctacgcggagttcctgcaa
gccgaatccacggccgacggccgcaaggaatccggcctgcaggcggccttccagtcggtg
ttccccatctcgagccattcgggcagcgcccgcctcgagtacgtgagctacgccctgggc
gagcccccgttcgacgtggtcgagtgccagcagcgcggcctcaccttcgccagcccgctg
cgcgcgaaggttcgcctggtcatcatggaccgcgaggcgagcaagcccacgatcaaggaa
atgaaggagcaggaggtctacatgggcgagatcccgctcatgacccgcaacggctccttc
gtgatcaacggcaccgagcgcgtcatcgtgtcccagctgcaccgctccccgggcgtgttc
ttcgagcacgaccgcggcaagacgcactcgtcgggcaagctgctgttctccgcgcgcgtg
atcccgtaccgcggctcgtggctcgacttcgagttcgacccgaaggactacctctacttc
cgcgtcgaccgccgccgcaagatgccggtgacgatcctgctgaaggcgctcggctacaag
cccgagcagatcctcgagcacttcttctcgttcgaccagttccacgtcacgaagaagggc
atcgagttcgacgtggtccccgagcgcatgcgcggcgagatcgcgcgcttcgacatcgtc
acgaaggccggcaaggtgctggtccagaaggacaagcgcatcacggtgaagcacatccgc
gagatggaagccgcgggcatgaagaagctcaccgtcgagccggacttcatgctcggccgc
gcgctggccaagagcctggtcaacaaggagaccggtgaagtcgtcgcgaacgtgaacgac
gagatcaccgaggccctgatgaagaagatcctcgacgcgggcgtcgaggacgtgaagacg
atctacaccaacgacctggaccagggtccgtacatctcgcagaccctgcgcatcgacgag
accgtcgaccagatgaacgcccaggtcgcgatctaccgcatgatgcgccccggcgaaccg
ccgaccgaagaggccgtgaagaccctcttcagcgggctcttcttcaacgaagaccgctac
gacctgtcggacgtgggccgcatgaagttcaaccgccgcgtgggcaacgaccagctcacg
ggcccgatgacgctgtccaacgaggacatcgtcgcggtcatcaagatcctggtcgagctg
cgcaacggccgcggcgagatcgacgacatcgaccacctcggcaaccgccgcgtgcgttcg
gtgggcgaactcgccgaaaaccagttccgttcgggcctggtgcgcgtcgagcgcgcggtg
cgcgagcgcctctcgcaggccgagagcgagcaactgatgccgcacgacctgatcaacgcg
aagccggtatccgccgcgatcaaggagttcttcggctcgtcccagctctcgcagttcatg
gaccagacgaacccgctgtccgagatcacgcacaagcgccgcatctcggccctcggcccg
ggcggcttgacgcgcgagcgcgccggcttcgaggtgcgcgacgtgcacccgacgcactac
ggccgtgtctgcccgatcgagacgccggaaggcccgaacatcggcctcatcaactcgctc
gccctgtacgcccgcaccaacgagtacggcttcatcgagacgccgtaccggaaggtgaag
gacgccaaggtcaccaaggacatcgagtacctctcggcgatcgaggaaggcaagtacgtg
atcgcgcaggcgaacgccgaggtcgacaagaccggcaagttcgtcgacgaactggtctcg
tgccgccaccggaacgaattcacgctgtccggcccggagaagatcgagtacatcgacgtg
gcgccctcgcagatcgtgtcggtcgccgcctcgctgatcccgttcctcgagcatgacgac
gcgaaccgcgcgctgatgggctcgaacatgcagcgccaggcggttccgtgcctgcgcgcc
gagaagtcgctcgtcggcaccggcatcgagcgcaccgtggccatcgactccggcacggcc
gtccaggcccgccgcggcggccgcatcgactacgtggacgccggccgcatcgtcgtccgc
gtgaatgacaacgagacccgcccgggcgaagccggcgtggacatctacaacctcacgaag
tacacgcgttccaaccagaacacgaacatcaaccagcgtccgctggtgaaggtgaacgac
cagatcgccgccggcgacgtggtcgcggacggcgcctcgaccgacatgggcgagctggcg
ctgggccagaacctgctggtcgcgttcatgccctggaacggctacaacttcgaggactcc
atcctcatctccgagcgcatcgtcgccgaagaccgctacacctcgatccacatcgaggag
ctggtcgtcgtcgcgcgcgacacgaagctgggcgccgaggagatcacccgcgacatctcg
aacctctccgagcgcatgctttcgcgcctggacgagtcgggcatcgtctacatcggggcc
gaagtcgaggccggcgacgtgctggtgggcaaggtcaccccgaagggcgagacgcaactc
acgccggaagagaagctgctgcgcgccatcttcggcgagaaggcctcggacgtgaaggac
acgtcgctgcgcgtgccgtcgggcatcaacggcaccgtgatcgacgtccaggtcttcacg
cgcgagggcatccagcgcgacaagcgcgcccagcagatcatcgacgagcagctgaaggac
taccggaaggacctgcacgaccagctgcgcatcgtcgaggacgacctcttcgcgcgcctg
gaacgcatgctcaccggcaagaccgccaagggcggtccgaagaagctcgccaagggcgcg
aagatcgtcaagacgtacctggccgagctcgagcgccacgagtggttcgacatccgactc
accgatgacgacgccgccgtgcagctggagcagctgcgcgagagcctcgacctcacccgc
aaggagttcgacaaggccttcgaggagaagaagaagaagctcacgcagggcgacgagctg
cccccgggcgtgcagaagatggtgaaggtctacgtcgcggtgaagcgccgcctgcagccg
ggcgacaagatggccggccgccacggcaacaagggcgtgatctccaagatcgtcccggtc
gaggacatgcccttcatggccgacggcacccccgtcgacatcgtgctgaacccgctgggc
gtgccctcgcggatgaacgtgggccagatcctcgagacgcacctgggctgggccgccaag
ggcctgggccatcgcatccaggagatgctccgcgcccaggaagcgccggcgaagctgcgc
aagtacctcgagaagatctacaacggggcgggcaagaaggaagacctcgcctcgttcacg
gacgaggagatcatcgagctgtcgcgcaacctcacggcgggcgttccgttcgccacgccg
gtgttcgatggcgcgaccgaagtcgagatcaaggacatgctggagctcgcaggcctgccc
cgtaccggccagatcacgctgtacgacggccgcacgggcgacgccttcgatcgccaggtc
acggtcggctacatgcacatcctgaagctgcatcacctggtcgacgacaagatgcacgcg
cgctcgaccggcccgtactcgctcgtcacccagcagccgctgggcggcaaggcgcagttc
ggtggccagcgcttcggcgagatggaggtctgggcgctggaagcctacggcgcgtcgtac
acgctgcaggagatgctcacggtcaagtcggacgacacgcagggccgcacgaaggtctac
gagaacatcgtgaagggcgagcacaagatcgaggcgggcatgcccgagtcgttcaacgtg
ctggtgaaggaaatccgctccctcgcgatcgacatcgacctcgagcgttattga
DBGET
integrated database retrieval system
