Betaproteobacteria bacterium GR16-43: BWI17_11330
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Entry
BWI17_11330 CDS
T04726
Name
(GenBank) heavy metal transporter
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
beba
Betaproteobacteria bacterium GR16-43
Pathway
beba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
beba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BWI17_11330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
beba03019
]
BWI17_11330
03009 Ribosome biogenesis [BR:
beba03009
]
BWI17_11330
Enzymes [BR:
beba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BWI17_11330
Messenger RNA biogenesis [BR:
beba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BWI17_11330
Ribosome biogenesis [BR:
beba03009
]
Prokaryotic type
rRNA helicases
BWI17_11330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
APV50227
UniProt:
A0A1P8FJD7
LinkDB
All DBs
Position
complement(2288820..2290574)
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AA seq
584 aa
AA seq
DB search
MPKNAPPQEEAPAPQNAGFSALGLDPKIVAALTTLGYEEPTPIQQETIPTLIAGKDLLGQ
AATGTGKTAAFALPILQRIVNEGRGGESPTAVVLVPTRELAMQVAEAVHRYGKALGIRVL
PIYGGQPIGRQLYAIRAGVDVVVATPGRALDHIRRGSLQMGGVRIVVLDEADEMLDMGFA
EDIEAVLKESPATRQTVLFSATMPPRIEAIAKRNQRDPVRIRIAKPVAKAGEAPKVRQQA
YLLPRSSKMGALGRILDLESPAAAIIFCRTRTEVDELTETLSARGYKAEALHGGMTQDIR
DKVMRRVRAGDSELLVATDVAARGLDIDRLTHVINYDLPAAPEAYVHRIGRVGRAGREGV
AITLVEPREHHALRNIERLTKHTIQIAKVPTVADLRTKRLEVTLASLREALVADDNEHYR
VVVDSLSDAYDPIQIAMAAVKLYHQAAIGDEEEQEEIAEASRPEAPPDRQSQSTPRASPG
FSRFSKAAGADGGTTPPRKRGGPDLDMARIFIGAGREAGIRPQDLVGAIANEAKVAGNLI
GAIQITDRFSIVEVPEQVAQQVIKALGNTTLRGKKVPVRRDKAN
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagaacgccccgccgcaggaagaagcccccgccccgcagaacgccggtttttcg
gccctcggcctcgatccgaagatcgtcgccgccctcaccacgctcggctatgaagagccg
acgccgatccagcaggagaccatccccaccctgatcgcgggcaaggacctcctcggccag
gccgccaccggaacgggcaagacggccgcgttcgcgcttccgatcctgcagcgcatcgtg
aacgaaggccgtggcggcgagagcccgacggctgtcgtgctggtgcccacgcgcgagctc
gcgatgcaggtggccgaagccgtgcaccgctacggcaaggcgctgggcatccgcgtgctg
ccgatctacggcggccaacccatcggccgccagctctatgcgatccgcgccggtgtcgat
gtcgtggtcgccacgccgggccgggcgctggaccacatccgccgcggcagcctgcagatg
ggcggcgtgcgcatcgtggtgctcgatgaagccgacgagatgctcgacatgggtttcgcc
gaggacatcgaggcggtgctgaaggaatcgcccgccacgcgccagaccgtgctcttctcg
gccacgatgccgccgcgcatcgaggcgatcgccaagcgcaaccagcgcgacccggtgcgc
attcgcatcgcgaagccggttgcgaaagcgggcgaagcgccgaaggttcgccagcaggcc
tacctgctgccacgttcctcgaagatgggcgcgctgggacggatcctcgatctcgagtcg
cccgccgccgcgatcatcttctgccgcacgcgcacggaagtggacgagctcaccgaaacg
ctgagcgcccgcggctacaaggccgaagcgctgcacggcggcatgacgcaagacatccgc
gacaaggtgatgcgccgcgtgcgcgccggggattccgaattgctcgttgccaccgacgtc
gcggcgcgcggcctcgacatcgatcgcctcacgcacgtcatcaactacgaccttcccgcg
gctccggaagcctacgtccatcgcatcgggcgcgtcggacgcgcgggacgcgaaggcgtg
gcgatcaccctcgtcgagccgcgtgagcaccatgcgcttcgcaacatcgagcgcctcacc
aagcacaccatccagatcgcgaaagtacccaccgtcgccgaccttcgcaccaagcgcctc
gaagtcacgctcgcctcgctgcgcgaagcgctcgtcgccgacgacaacgagcactatcgc
gtcgtggtggattcgctctccgatgcctacgacccgatccagatcgcgatggcagcggtg
aagctctatcaccaggccgcgatcggcgacgaggaagagcaggaagagatcgccgaggct
tcgcgcccggaagcgccgccggatcgacagagccaatccacgccgcgcgcatctccgggc
ttctcgcgcttctcgaaggcggctggcgcggacggcggcaccacgccgccgcgcaagcgc
ggcggtcccgacctcgacatggcgcgcatcttcatcggagcgggtcgcgaagccggcatc
cggccgcaggatctcgtgggcgccatcgcgaacgaagcgaaagtcgccggcaacttgatc
ggcgcgatccagatcaccgatcgcttctcgatcgtggaagtgcccgagcaggtggcgcag
caagtgatcaaggcgctcgggaacacgaccctgcgcggcaagaaagtcccggtccggcgc
gacaaggcgaactga
DBGET
integrated database retrieval system
