Betaproteobacteria bacterium GR16-43: BWI17_16535
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Entry
BWI17_16535 CDS
T04726
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
beba
Betaproteobacteria bacterium GR16-43
Pathway
beba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
beba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BWI17_16535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
beba03400
]
BWI17_16535
Enzymes [BR:
beba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BWI17_16535
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BWI17_16535
DNA repair and recombination proteins [BR:
beba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BWI17_16535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DNA_ligase_ZBD
Ribosomal_S13
Zn_ribbon_TFIIB
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
APV51148
UniProt:
A0A1P8FM68
LinkDB
All DBs
Position
3510550..3511437
Genome browser
AA seq
295 aa
AA seq
DB search
MPELPDVQVYLEALDRRVVGQRLERIKLSSPFVLRSVDPPPDAVFGKTVLGVRRIGKRIV
LAFDGAFFLVLHLMIAGRLRWRDPGGKPGVGAKIVLATFEFPSGFLLFTEAGSKKRASLT
VVRGEDALKALDPGGIEPLEASTAQFQAALARENHTLKRALTDPRLFSGIGNAYSDEILH
AAKLSPMKLTKSLNEEESGRLHQATRETLTRWTQWLRDETGDGFPEKVTAFHDRMAVHGR
YKLPCPVCGSPVQRIVYAENEANYCARCQTGGRLLADRSLSRLLKDDWPKSIDDL
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattgcccgacgtgcaggtctacctggaggccctggaccgccgcgtcgtgggc
cagcggctggagcgcatcaagctctcgagtcctttcgtcctgcgcagcgtcgatccgccc
ccggatgcggtcttcggcaagacggtgctgggcgtgcggcgcatcggcaagcggatcgtc
ctcgcgttcgacggcgccttttttctcgtcctccacctgatgatcgccgggcggctgcgg
tggcgcgatccgggcggaaaaccgggcgtgggcgcgaagatcgtgctcgcgacgttcgag
ttcccgtccggcttcctgctcttcaccgaggccggatcgaagaagcgggcatcgctcacc
gtggtgcgcggcgaggacgcgctgaaagcgctcgatccgggcggcatcgaaccgctggaa
gcgtccaccgcgcagttccaggcggccctggcgcgcgagaaccacacgctcaaacgcgcc
ctcaccgacccgcggctcttcagcggcatcggcaacgcgtattcggacgagatcctccat
gcggcgaagctctcgccgatgaagctcacgaagtccttgaacgaggaagaatccggacgc
ctgcaccaggcgacgcgcgagacgctcacgcgctggacgcagtggctgcgagacgaaacg
ggagacggttttcccgagaaggtgaccgcattccacgaccggatggccgtgcacgggcgc
tacaaattgccctgccccgtctgcggctctccggtacagcgcatcgtgtacgcggagaac
gaggcgaactactgtgcccggtgccagacgggcggacggctgctggccgatcgcagcctg
tcgcggctgctgaaggacgactggccgaagtcgatcgacgacctctga
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